combineCJS: Combine multiple CJS models

In actel: Acoustic Telemetry Data Analysis

Combine multiple CJS models

Description

Combine multiple CJS models

Usage

combineCJS(..., estimate = NULL, fixed.efficiency = NULL, silent = FALSE)

Arguments

...	The detection matrices to be joined, or a list containing detection matrices
estimate	An estimate of the last array's efficiency, between 0 and 1.
fixed.efficiency	A vector of fixed efficiency estimates [0, 1]. length(fixed.efficiency) must match ncol(input).
silent	Logical: Should messages be printed? This argument is mainly intended for function calls running within actel's analyses.

Value

A list containing:

• absolutes A data frame with the absolute number of tags detected and missed,

• efficiency A vector of calculated array detection efficiencies,

• survival A matrix of calculated survivals,

• lambda A combined detection efficiency * survival estimate for the last array.

actel documentation built on Oct. 19, 2023, 9:08 a.m.