adhoc: Calculate Ad Hoc Distance Thresholds for DNA Barcoding Identification
Version 1.1

Two functions to calculate intra- and interspecific pairwise distances, evaluate DNA barcoding identification error and calculate an ad hoc distance threshold for each particular reference library of DNA barcodes. Specimen identification at this ad hoc distance threshold (using the best close match method) will produce identifications with an estimated relative error probability that can be fixed by the user (e.g. 5%).

Package details

AuthorGontran Sonet
Date of publication2017-03-17 18:56:42 UTC
MaintainerGontran Sonet <gosonet@gmail.com>
LicenseGPL (>= 2)
Version1.1
URL http://jemu.myspecies.info/computer-programs
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("adhoc")

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adhoc documentation built on May 29, 2017, 3:46 p.m.