NEWS.md

In agvgd: An R Implementation of the 'Align-GVGD' Method

agvgd 0.1.2

• Fixed a bug with read_substitutions() that would not parse positions correctly.
• Added a new substitutions example file lee2010_sub.txt.
• Added a new function read_agvgdweb_results() aimed at developers.

agvgd 0.1.1

• The main function agvgd() had an alias, align_agvgd(), which is now removed to avoid confusion.
• A few more functions are now exported allowing access to low-level routines: gd(), gv() and cpv_ranges().
• alignment_pos_to_residue_pos() has been renamed to poi_to_res() and residue_pos_to_alignment_pos() to res_to_poi().
• Code coverage is now tracked.
• Added a NEWS.md file to track changes to the package.

agvgd 0.1.0

• First version of {agvgd}.

agvgd documentation built on Sept. 11, 2022, 1:07 a.m.