plot.feem | R Documentation |
Plot a 2D fluorescence intensity surface as a pseudo-colour image.
## S3 method for class 'feem'
plot(
x, xlab, ylab, cuts = 128,
col.regions = marine.colours(256), ...
)
## S3 method for class 'feemcube'
plot(
x, xlab, ylab, cuts = 128,
col.regions = marine.colours(256), as.table = TRUE, ...
)
## S3 method for class 'feem.resid'
plot(
x, ..., at, col.regions = diverging.colours(256)
)
x |
An FEEM object. |
xlab |
The x-axis label for the plot, with a sane default. |
ylab |
The y-axis label for the plot, with a sane default. |
cuts |
The number of distinct levels the intensity would be divided into, areas between them assigned different colours. |
col.regions |
The palette to take the colours from, a character vector of R colour specifications. |
at |
The breakpoints in the intensity values. For residual plots,
automatically set in a symmetric manner, ignoring the |
as.table |
Whether to draw the panels left to right, top to bottom. (Otherwise they are drawn left to right, bottom to top.) |
... |
Passed as-is to |
A lattice plot object. Its print
or plot
method
will draw the plot on an appropriate plotting device.
levelplot
plot(feem(matrix(1:42/42, nrow = 7), 320 + 1:7, 300 + 1:6))
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