define_palette: Define color palette.
In alignfigR: Visualizing Multiple Sequence Alignments with 'ggplot2'
Description
Usage
Arguments
Value
Examples
Description
This function sets up, either using default or user-specified options, the color-coding
scheme used to plot sequences.
Usage
1
define_palette(inpalette, uniques)
Arguments
inpalette
Either a user-specified named-array of colors or flag for default options (dna, rna, protein, random, ...)
uniques
Unique characters found in alignment. Used to create the random color scheme.
Value
Color palette named-array.
Examples
1
2
palette <- define_palette("DNA", c("A", "G", "T"))
palette <- define_palette("protein")
alignfigR documentation built on May 1, 2019, 9:11 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
This function sets up, either using default or user-specified options, the color-coding scheme used to plot sequences.
Usage
1 | define_palette(inpalette, uniques)
|
Arguments
inpalette |
Either a user-specified named-array of colors or flag for default options (dna, rna, protein, random, ...) |
uniques |
Unique characters found in alignment. Used to create the random color scheme. |
Value
Color palette named-array.
Examples
1 2 | palette <- define_palette("DNA", c("A", "G", "T"))
palette <- define_palette("protein")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.