allelematch: Identifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present

Tools for the identification of unique of multilocus genotypes when both genotyping error and missing data may be present; targeted for use with large datasets and databases containing multiple samples of each individual (a common situation in conservation genetics, particularly in non-invasive wildlife sampling applications). Functions explicitly incorporate missing data and can tolerate allele mismatches created by genotyping error. If you use this package, please cite the original publication in Molecular Ecology Resources (Galpern et al., 2012), the details for which can be generated using citation('allelematch'). For a complete vignette, please access via the Data S1 Supplementary documentation and tutorials (PDF) located at <doi:10.1111/j.1755-0998.2012.03137.x>.

Package details

AuthorPaul Galpern <pgalpern@gmail.com>
MaintainerTodd Cross <todd.cross@gmail.com>
LicenseGPL (>= 2)
Version2.5.3
URL <doi:10.1111%2Fj.1755-0998.2012.03137.x>
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("allelematch")

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allelematch documentation built on Aug. 24, 2023, 5:06 p.m.