allelematch: Identifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present

Tools for the identification of unique of multilocus genotypes when both genotyping error and missing data may be present. The package is targeted at those working with large datasets and databases containing multiple samples of each individual, a situation that is common in conservation genetics, and particularly in non-invasive wildlife sampling applications. Functions explicitly incorporate missing data, and can tolerate allele mismatches created by genotyping error. If you use this tool, please cite the package using the journal article in Molecular Ecology Resources (Galpern et al., 2012). Please use citation('allelematch') to call the full citation. For users with access to the associated journal article, tutorial material is also available as supplementary material to the article describing this software, the citation for which can be called using citation('allelematch').

Package details

AuthorPaul Galpern [aut], Todd Cross [cre, ctb], Katie Zarn [ctb]
MaintainerTodd Cross <todd.cross@gmail.com>
LicenseGPL-3
Version2.5.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("allelematch")

Try the allelematch package in your browser

Any scripts or data that you put into this service are public.

allelematch documentation built on May 2, 2019, 12:31 p.m.