Man pages for amadeus
Accessing and Analyzing Large-Scale Environmental Data

apply_extent	Apply extent to the processed data
as_mysftime	Create an 'sftime' object
calc_check_time	Check time values
calc_message	Send progress messages
calc_prepare_locs	Prepare extraction locations
calc_return_locs	Prepare covariates for return
calc_setcolumns	Set column names
calc_time	Prepare time values
calculate_covariates	Calculate covariates wrapper function
calculate_ecoregion	Calculate ecoregions covariates
calculate_geos	Calculate atmospheric composition covariates
calculate_gmted	Calculate elevation covariates
calculate_gridmet	Calculate gridMET covariates
calculate_groads	Calculate roads covariates
calculate_hms	Calculate wildfire smoke covariates
calculate_koppen_geiger	Calculate climate classification covariates
calculate_lagged	Calculate temporally lagged covariates
calculate_merra2	Calculate meteorological and atmospheric covariates
calculate_modis	Calculate MODIS product covariates in multiple CPU threads
calculate_modis_daily	A single-date MODIS worker
calculate_narr	Calculate meteorological covariates
calculate_nei	Calculate road emissions covariates
calculate_nlcd	Calculate land cover covariates
calculate_population	Calculate population density covariates
calculate_temporal_dummies	Calculate temporal dummy covariates
calculate_terraclimate	Calculate TerraClimate covariates
calculate_tri	Calculate toxic release covariates
calc_worker	Perform covariate extraction
check_destfile	Check if destination file exists or is 0 bytes.
check_for_null_parameters	Check parameters
check_geom	Check that 'geom' value is one of 'FALSE', '"sf"', or...
check_mysf	Check 'sf' object
check_mysftime	Check 'sftime' object
check_urls	Implement 'check_url_status'
check_url_status	Check HTTP status
download_aqs	Download air quality data
download_cropscape	Download CropScape data
download_data	Download raw data wrapper function
download_ecoregion	Download ecoregion data
download_epa_certificate	Check EPA certificate
download_geos	Download atmospheric composition data
download_gmted	Download elevation data
download_gridmet	Download gridMET data
download_groads	Download roads data
download_hash	Create hash of downloaded files.
download_hms	Download wildfire smoke data
download_huc	Download National Hydrography Dataset (NHD) data
download_koppen_geiger	Download climate classification data
download_merra2	Download meteorological and atmospheric data
download_modis	Download MODIS product files
download_narr	Download meteorological data
download_nei	Download road emissions data
download_nlcd	Download land cover data
download_permit	Check data download acknowledgement
download_population	Download population density data
download_prism	Download PRISM data
download_remove_command	Remove download commands
download_remove_zips	Remove zip files
download_run	Run download commands
download_sanitize_path	Sanitize directory
download_setup_dir	Setup directory
download_sink	Sink download commands
download_terraclimate	Download TerraClimate data
download_tri	Download toxic release data
download_unzip	Unzip zip files
dt_as_mysftime	Convert a 'data.table' to an 'sftime'
extract_urls	Extract download URLs
generate_date_sequence	Generate date sequence
generate_time_sequence	Generate time sequence
is_date_proper	Check date format
narr_variable	Sort NOAA NARR variables
process_aqs	Process U.S. EPA AQS daily CSV data
process_blackmarble	Assign VIIRS Black Marble products corner coordinates to...
process_blackmarble_corners	Process Black Marble corners
process_collection	Process GEOS-CF and MERRA2 collection codes
process_conformity	Check input assumptions
process_covariates	Process raw data wrapper function
process_cropscape	Process CropScape data
process_ecoregion	Process ecoregion data
process_flatten_sds	Process MODIS layers
process_geos	Process atmospheric composition data
process_gmted	Process elevation data
process_gmted_codes	Process elevation statistic and resolution codes
process_gridmet	Process gridMET data
process_gridmet_codes	Process gridMET variable codes
process_groads	Process roads data
process_hms	Process wildfire smoke data
process_huc	Retrieve Hydrologic Unit Code (HUC) data
process_koppen_geiger	Process climate classification data
process_locs_radius	Process locations buffer
process_locs_vector	Process locations as 'SpatVector'
process_merra2	Process meteorological and atmospheric data
process_merra2_time	Process MERRA2 time steps
process_modis_merge	Process MODIS .hdf files
process_modis_sds	Process MODIS sub-datasets
process_modis_swath	Mosaic MODIS swaths
process_modis_warp	Warp MODIS swath data into rectilinear grid raster
process_narr	Process meteorological data
process_nei	Process road emissions data
process_nlcd	Process land cover data
process_population	Process population density data
process_prism	Process PRISM data
process_sedac_codes	Process population resolution code
process_terraclimate	Process TerraClimate data
process_terraclimate_codes	Process terraClimate variable codes
process_tri	Process toxic release data
process_variable_codes	Filter gridMET and terraClimate variable names and variable...
read_commands	Import download commands
rename_time	Rename '$time'
sf_as_mysftime	Convert an 'sf' to an 'sftime'
sftime_as_mysftime	Convert an 'sftime' to a 'mysftime'
sftime_as_sf	Convert an 'sftime' to an 'sf'
sftime_as_spatraster	Convert an 'sftime' to a 'SpatRaster'
sftime_as_spatrds	Convert an 'sftime' to a 'SpatRasterDataset'
sftime_as_spatvector	Convert an 'sftime' to a 'SpatVector'
spatraster_as_sftime	Convert a 'SpatRaster' to an 'sftime'
spatrds_as_sftime	Convert a 'SpatRasterDataset' to an 'sftime'
spatvector_as_sftime	Convert a 'SpatVector' to an 'sftime'
sum_edc	Calculate isotropic Sum of Exponentially Decaying...
test_download_functions	Download unit tests