calc_worker: Perform covariate extraction

In amadeus: Accessing and Analyzing Large-Scale Environmental Data

Perform covariate extraction

Description

Extract covariate values from SpatRaster object passed from process_*().

Usage

calc_worker(
  dataset,
  from,
  locs_vector,
  locs_df,
  fun,
  variable = 1,
  time,
  time_type = c("date", "hour", "year", "yearmonth", "timeless"),
  radius,
  level = NULL,
  max_cells = 1e+08,
  ...
)

Arguments

dataset	character(1). Dataset name.
from	SpatRaster(1). Cleaned SpatRaster object.
locs_vector	SpatVector(1). Cleaned SpatVector object passed from calc_prepare_locs(). Contains location point/polygon values.
locs_df	data.frame(1). Cleaned data.frame object passed from calc_prepare_locs(). Contains location identifiers.
fun	character(1). Summary function. Passed to terra::extract().
variable	integer. Position within the layer name containing the variable name/code.
time	integer. Position within the layer name containing the time value(s).
time_type	character(1). Type of time observation. One of "date", "hour", "year", "yearmonth", "timeless".
radius	integer(1). Buffer distance (m). Passed from calc_prepare_locs(). Used in column naming.
level	integer. Position within the layer name containing the vertical pressure level value (if applicable). Default = NULL.
max_cells	integer(1). Maximum number of cells to be read at once. Higher values will expedite processing, but will increase memory usage. Maximum possible value is 2^31 - 1. See exactextractr::exact_extract for details.
...	Placeholders.

Value

a data.frame object

amadeus documentation built on April 4, 2025, 12:21 a.m.