Analysis of dyadic network and relational data using additive and multiplicative effects (AME) models. The basic model includes regression terms, the covariance structure of the social relations model (Warner, Kenny and Stoto (1979), Wong (1982)), and multiplicative factor models (Hoff(2009)). Four different link functions accommodate different relational data structures, including binary/network data (bin), normal relational data (nrm), ordinal relational data (ord) and data from fixed-rank nomination schemes (frn). Several of these link functions are discussed in Hoff, Fosdick, Volfovsky and Stovel (2013). Development of this software was supported in part by NIH grant R01HD067509.

Author | Peter Hoff, Bailey Fosdick, Alex Volfovsky, Yanjun He |

Date of publication | 2015-06-26 20:09:47 |

Maintainer | Peter Hoff <pdhoff@uw.edu> |

License | GPL-3 |

Version | 1.1 |

**addhealthc3:** AddHealth community 3 data

**addhealthc9:** AddHealth community 9 data

**addlines:** Add lines

**ame:** AME model fitting routine

**amen-package:** Additive and Multiplicative Effects Models for Networks and...

**ame_rep:** AME model fitting routine for replicated relational data

**circplot:** Circular network plot

**coldwar:** Cold War data

**comtrade:** Comtrade data

**design_array:** Computes the design socioarray of covariate values

**dutchcollege:** Dutch college data

**el2sm:** Edgelist to sociomatrix

**gofstats:** Goodness of fit statistics

**IR90s:** International relations in the 90s

**lazegalaw:** Lazega's law firm data

**mhalf:** Symmetric square root of a matrix

**netplot:** Network plotting

**plot.ame:** Plot results of an AME object

**raSab_bin_fc:** Simulate a and Sab from full conditional distributions under...

**raSab_cbin_fc:** Simulate a and Sab from full conditional distributions under...

**raSab_frn_fc:** Simulate a and Sab from full conditional distributions under...

**rbeta_ab_fc:** Gibbs sampling of additive row and column effects and...

**rbeta_ab_rep_fc:** Gibbs sampling of additive row and column effects and...

**rmvnorm:** Simulation from a multivariate normal distribution

**rrho_mh:** Metropolis update for dyadic correlation

**rrho_mh_rep:** Metropolis update for dyadic correlation with independent...

**rs2_fc:** Gibbs update for dyadic variance

**rs2_rep_fc:** Gibbs update for dyadic variance with independent replicate...

**rUV_fc:** Gibbs sampling of U and V

**rUV_rep_fc:** Gibbs sampling of U and V

**rUV_sym_fc:** Gibbs sampling of U and V

**rwish:** Simulation from a Wishart distribution

**rZ_bin_fc:** Simulate Z based on a probit model

**rZ_cbin_fc:** Simulate Z given fixed rank nomination data

**rZ_frn_fc:** Simulate Z given fixed rank nomination data

**rZ_nrm_fc:** Simulate missing values in a normal AME model

**rZ_ord_fc:** Simulate Z given the partial ranks

**rZ_rrl_fc:** Simulate Z given relative rank nomination data

**sampsonmonks:** Sampson's monastery data

**sheep:** Sheep dominance data

**simY_bin:** Simulate a network, i.e. a binary relational matrix

**simY_frn:** Simulate an relational matrix based on a fixed rank...

**simY_nrm:** Simulate a normal relational matrix

**simY_ord:** Simulate an ordinal relational matrix

**simY_rrl:** Simulate an relational matrix based on a relative rank...

**simZ:** Simulate Z given its expectation and covariance

**sm2el:** Sociomatrix to edgelist

**summary.ame:** Summary of an AME object

**Xbeta:** Linear combinations of submatrices of an array

**xnet:** Network embedding

**YX_bin:** binary relational data and covariates

**YX_bin_long:** binary relational data and covariates

**YX_cbin:** Censored binary nomination data and covariates

**YX_frn:** Fixed rank nomination data and covariates

**YX_nrm:** normal relational data and covariates

**YX_ord:** ordinal relational data and covariates

**YX_rrl:** row-specific ordinal relational data and covariates

**zscores:** rank-based z-scores

amen

amen/inst

amen/inst/doc

amen/inst/doc/amen.R

amen/inst/doc/amen.pdf

amen/inst/doc/amen.Rnw

amen/NAMESPACE

amen/data

amen/data/YX_bin.RData

amen/data/coldwar.RData

amen/data/YX_frn.RData

amen/data/comtrade.RData

amen/data/addhealthc9.RData

amen/data/addhealthc3.RData

amen/data/sheep.RData

amen/data/YX_ord.RData

amen/data/lazegalaw.RData

amen/data/YX_nrm.RData

amen/data/dutchcollege.RData

amen/data/YX_rrl.RData

amen/data/YX_cbin.RData

amen/data/datalist

amen/data/YX_bin_long.RData

amen/data/sampsonmonks.RData

amen/data/IR90s.RData

amen/R

amen/R/simZ.R
amen/R/simY_bin.R
amen/R/circplot.R
amen/R/rZ_frn_fc.R
amen/R/Xbeta.R
amen/R/summary.ame.R
amen/R/rZ_rrl.R
amen/R/simY_frn.R
amen/R/rbeta_ab_fc.R
amen/R/simY_rrl.R
amen/R/simY_ord.R
amen/R/rZ_bin_fc.R
amen/R/simY_nrm.R
amen/R/rmvnorm.R
amen/R/rZ_cbin_fc.R
amen/R/el2sm.R
amen/R/rbeta_ab_rep_fc.R
amen/R/netplot.R
amen/R/sm2el.R
amen/R/rs2_fc.R
amen/R/ame_rep.R
amen/R/rUV_sym_fc.R
amen/R/gofstats.R
amen/R/amen-package.R
amen/R/addlines.R
amen/R/rrho_mh.R
amen/R/rUV_rep_fc.R
amen/R/raSab_cbin_fc.R
amen/R/rUV_fc.R
amen/R/rs2_rep_fc.R
amen/R/xnet.R
amen/R/rwish.R
amen/R/rZ_ord_fc.R
amen/R/raSab_frn_fc.R
amen/R/rrho_mh_rep.R
amen/R/mhalf.R
amen/R/zscores.R
amen/R/ame.R
amen/R/plot.ame.R
amen/R/rZ_nrm_fc.R
amen/R/raSab_bin_fc.R
amen/R/design_array.R
amen/vignettes

amen/vignettes/amen.Rnw

amen/MD5

amen/build

amen/build/vignette.rds

amen/DESCRIPTION

amen/man

amen/man/rZ_rrl_fc.Rd
amen/man/simY_rrl.Rd
amen/man/raSab_cbin_fc.Rd
amen/man/addhealthc3.Rd
amen/man/ame.Rd
amen/man/rmvnorm.Rd
amen/man/rUV_fc.Rd
amen/man/lazegalaw.Rd
amen/man/gofstats.Rd
amen/man/design_array.Rd
amen/man/YX_bin.Rd
amen/man/raSab_bin_fc.Rd
amen/man/YX_cbin.Rd
amen/man/netplot.Rd
amen/man/comtrade.Rd
amen/man/mhalf.Rd
amen/man/simY_nrm.Rd
amen/man/sampsonmonks.Rd
amen/man/simY_ord.Rd
amen/man/YX_rrl.Rd
amen/man/sheep.Rd
amen/man/dutchcollege.Rd
amen/man/IR90s.Rd
amen/man/rUV_rep_fc.Rd
amen/man/YX_bin_long.Rd
amen/man/rrho_mh_rep.Rd
amen/man/Xbeta.Rd
amen/man/plot.ame.Rd
amen/man/rs2_fc.Rd
amen/man/zscores.Rd
amen/man/YX_nrm.Rd
amen/man/addhealthc9.Rd
amen/man/rZ_frn_fc.Rd
amen/man/raSab_frn_fc.Rd
amen/man/rZ_nrm_fc.Rd
amen/man/YX_ord.Rd
amen/man/rbeta_ab_fc.Rd
amen/man/rZ_cbin_fc.Rd
amen/man/rZ_ord_fc.Rd
amen/man/rs2_rep_fc.Rd
amen/man/circplot.Rd
amen/man/simY_frn.Rd
amen/man/simY_bin.Rd
amen/man/rZ_bin_fc.Rd
amen/man/coldwar.Rd
amen/man/YX_frn.Rd
amen/man/addlines.Rd
amen/man/sm2el.Rd
amen/man/summary.ame.Rd
amen/man/ame_rep.Rd
amen/man/rUV_sym_fc.Rd
amen/man/rrho_mh.Rd
amen/man/amen-package.Rd
amen/man/xnet.Rd
amen/man/el2sm.Rd
amen/man/simZ.Rd
amen/man/rbeta_ab_rep_fc.Rd
amen/man/rwish.Rd
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