spleen: Spleen Data set

In anapuce: Tools for Microarray Data Analysis

Description

An example data set for paired data analysis. A dataframe with the normalized Spleen data set as used in the original article.

Format

spleen is a dataframe. The first column contains gene names. The 6 columns A.1 to A.6 contain normalized mean log-intensity and the 6 columns M.1 to M.6 correspond to normalized log-ratio

References

P. Delmar, Robin, S., Tronik-Le Roux S. and Daudin J.-J. (2005) Mixture model on the variance for the differential analysis of gene expression data, JRSS series C, 54(1), 31:50

See Also

DiffAnalysis

Examples

data(spleen)
# resSpleen <- DiffAnalysis(spleen,n=1,ind.array=1:6,name.A="A.",name.M="M.",
# varmixt.meth=TRUE,dyeswap=TRUE,indDS=c(2,4,6))
# Histogramm of the raw-pvalues
# hist(resSpleen$PValueVM)

anapuce documentation built on May 2, 2019, 9:44 a.m.