archetypes: Archetypal Analysis

The main function archetypes implements a framework for archetypal analysis supporting arbitrary problem solving mechanisms for the different conceptual parts of the algorithm.

Author
Manuel J. A. Eugster [aut, cre], Friedrich Leisch [aut], Sohan Seth [ctb]
Date of publication
2014-04-10 09:17:57
Maintainer
Manuel J. A. Eugster <manuel@mjae.net>
License
GPL (>= 2)
Version
2.2-0

View on CRAN

Man pages

archetypes
Perform archetypal analysis on a data matrix.
archetypesFamily
Archetypes family constructor
archetypes-generics
Defined generics
archmap
Archetypal maps
archmap_projections
Archetypal map projections
as.archetypes
Archetypes object constructor
barplot.archetypes
Barplot of archetypes.
bestModel
Return best model
body
Exploring relationships in body dimensions
coef
Return coefficients
extract
Extract method
fitted
Return fitted data
kappa
Return kappa
movieplot
Archetypes movies.
nparameters
Return number of archetypes
panorama.archetypes
Panorma plot for archetypes.
parameters
Return fitted archetypes
pcplot
Add lines to an existing parallel coordinates plot.
pcplot.archetypes
Parallel coordinates of data and archetypes.
pcplot.default
Default parallel coordinates plot.
predict
Predict method for archetypal analysis fits
residuals
Return residuals
robustArchetypes
Robust archetypes
rss
Return residual sum of squares
screeplot.stepArchetypes
Screeplot of stepArchetypes.
simplexplot
Simplex visualization
skel
Exploring relationships in body dimensions, skeletal...
skeletonplot
Skeleton plot.
stepArchetypes
Run archetypes algorithm repeatedly
summary
Summary method for stepArchetypes object
toy
Toy data set
weightedArchetypes
Weighted archetypes
weights
Return weights
xyplot
Two-dimensional plot.
xyplot.archetypes
Plot of two-dimensional data and archetypes.
xyplot.robustArchetypes
Plot of two-dimensional data and robust archetypes.
xyplot.stepArchetypes
Plot of two-dimensional data and stepArchetypes.
xyplot.weightedArchetypes
Plot of two-dimensional data and weighted archetypes.

Files in this package

archetypes
archetypes/inst
archetypes/inst/opt
archetypes/inst/opt/robust-simulation
archetypes/inst/opt/robust-simulation/sim1.RData
archetypes/inst/opt/robust-simulation/sim2.RData
archetypes/inst/CITATION
archetypes/inst/doc
archetypes/inst/doc/archetypes.Rnw
archetypes/inst/doc/archetypes.pdf
archetypes/inst/doc/archetypes.R
archetypes/NAMESPACE
archetypes/demo
archetypes/demo/robust-simulation.R
archetypes/demo/00Index
archetypes/demo/robust-toy.R
archetypes/demo/robust-ozone.R
archetypes/NEWS
archetypes/data
archetypes/data/skel.RData
archetypes/data/toy.RData
archetypes/data/body.RData
archetypes/R
archetypes/R/archetypes-weighted.R
archetypes/R/archetypes-class.R
archetypes/R/archetypes-pcplot.R
archetypes/R/archetypes-map.R
archetypes/R/archetypes-movie.R
archetypes/R/archetypes-robust.R
archetypes/R/skeletonplot.R
archetypes/R/generics.R
archetypes/R/pcplot.R
archetypes/R/archetypes-barplot.R
archetypes/R/archetypes-panorama.R
archetypes/R/archetypes-kit.R
archetypes/R/archetypes-screeplot.R
archetypes/R/archetypes-step.R
archetypes/R/archetypes-xyplot.R
archetypes/R/archetypes-kit-blocks.R
archetypes/R/simplex-pot.R
archetypes/R/memento.R
archetypes/vignettes
archetypes/vignettes/rt-003.pdf
archetypes/vignettes/archetypes.Rnw
archetypes/vignettes/rt-002.pdf
archetypes/vignettes/archetypes.bib
archetypes/MD5
archetypes/build
archetypes/build/vignette.rds
archetypes/DESCRIPTION
archetypes/man
archetypes/man/pcplot.Rd
archetypes/man/xyplot.Rd
archetypes/man/robustArchetypes.Rd
archetypes/man/pcplot.default.Rd
archetypes/man/bestModel.Rd
archetypes/man/simplexplot.Rd
archetypes/man/residuals.Rd
archetypes/man/xyplot.weightedArchetypes.Rd
archetypes/man/skel.Rd
archetypes/man/toy.Rd
archetypes/man/as.archetypes.Rd
archetypes/man/archetypes.Rd
archetypes/man/rss.Rd
archetypes/man/xyplot.robustArchetypes.Rd
archetypes/man/body.Rd
archetypes/man/predict.Rd
archetypes/man/archetypes-generics.Rd
archetypes/man/kappa.Rd
archetypes/man/stepArchetypes.Rd
archetypes/man/archetypesFamily.Rd
archetypes/man/parameters.Rd
archetypes/man/screeplot.stepArchetypes.Rd
archetypes/man/barplot.archetypes.Rd
archetypes/man/archmap_projections.Rd
archetypes/man/skeletonplot.Rd
archetypes/man/fitted.Rd
archetypes/man/movieplot.Rd
archetypes/man/nparameters.Rd
archetypes/man/weights.Rd
archetypes/man/panorama.archetypes.Rd
archetypes/man/xyplot.stepArchetypes.Rd
archetypes/man/pcplot.archetypes.Rd
archetypes/man/extract.Rd
archetypes/man/xyplot.archetypes.Rd
archetypes/man/archmap.Rd
archetypes/man/coef.Rd
archetypes/man/summary.Rd
archetypes/man/weightedArchetypes.Rd