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#########################################################################/**
# @RdocPackage aroma.apd
#
# \description{
# \emph{This package has been deprecated. Do not start building new
# projects based on it.}
#
# @eval "getDescription(aroma.apd)"
# }
#
# \section{Requirements}{
# This package requires the packages \pkg{R.huge} and \pkg{affxparser}.
# }
#
# \section{Installation and updates}{
#
# To install this package, see \url{https://www.braju.com/R/}.
# }
#
# \section{To get started}{
# To get started, see:
# \enumerate{
# \item @see "readApd", @see "readApdUnits", @see "readApdRectangle"
# - Reads APD files.
# \item @see "celToApd" - creates an APD file from a CEL file.
# \item @see "cdfToApdMap" - creates an APD read map from a CDF file.
# \item @see "findApdMap" - finds an APD read map.
# \item @see "createApd", @see "writeApd" - creates APD files.
# \item @see "updateApd", @see "updateApdUnits" - updates APD files.
# }
# }
#
# \section{Search paths}{
# Typically you do not have to specify the pathname of the CDF file
# when reading APD files or similar. Instead, the chip type is
# obtained from the APD header and the corresponding APD file is
# search for in several predefined locations. For details how to
# specify the search path, see @see "affxparser::findCdf".
#
# Some APD files uses a corresponding read map in order to read data
# faster. The @see "findApdMap" method is used to find the
# corresponding APD map file containing the map vector. How to
# specify search paths for map files, see that method.
# }
#
# \section{How to cite this package}{
# Currently no information.
# }
#
# @author
#
# \section{License}{
# The releases of this package is licensed under
# LGPL version 2.1 or newer.
#
# The development code of the packages is under a private licence
# (where applicable) and patches sent to the author fall under the
# latter license, but will be, if incorporated, released under the
# "release" license above.
# }
#
# \section{References}{
# [1] @include "../incl/BengtssonH_2003.bib.Rdoc" \cr
# }
#
#*/#########################################################################
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