UnitTypesFile: The UnitTypesFile interface class

In aroma.core: Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework

The UnitTypesFile interface class

Description

Package: aroma.core
Class UnitTypesFile

Interface
~~|
~~+--UnitAnnotationDataFile
~~~~~~~|
~~~~~~~+--UnitTypesFile

Directly known subclasses:
AromaUnitTypesFile

public abstract static class UnitTypesFile
extends UnitAnnotationDataFile

A UnitTypesFile provides methods for querying the unit types of a given chip type, e.g. genotyping or copy-number unit, exon unit etc.

Usage

UnitTypesFile(...)

Arguments

...	Arguments passed to UnitAnnotationDataFile.

Methods

Methods:

	getUnitTypes	-
	nbrOfUnits	-

Methods inherited from UnitAnnotationDataFile:
byChipType, getAromaUflFile, getAromaUgpFile, getChipType, getDefaultExtension, getPlatform, nbrOfUnits

Methods inherited from Interface:
extend, print, uses

The aroma unit-type map

unknown=0, expression=1, genotyping=2, resequencing=3, tag=4, copynumber=5, genotypingcontrol=6, expressioncontrol=7

Author(s)

Henrik Bengtsson

aroma.core documentation built on June 25, 2024, 1:15 a.m.