segmentByGLAD.RawGenomicSignals: Segment copy numbers using the GLAD method

Description Usage Arguments Details Value Author(s) See Also

Description

Segment copy numbers using the GLAD method of the GLAD package.

Usage

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## S3 method for class 'RawGenomicSignals'
segmentByGLAD(this, ..., flavor=c("glad", "daglad"), cache=FALSE, force=FALSE,
  verbose=FALSE)

Arguments

...

Additional arguments passed to the segmentation function.

flavor

A character string specifying what flavor of GLAD should be used.

verbose

See Verbose.

Details

Internally glad or daglad is used to segment the signals. This segmentation method does not support weighted segmentation.

Value

Returns the fit object.

Author(s)

Henrik Bengtsson

See Also

For more information see RawGenomicSignals.


aroma.core documentation built on May 30, 2017, 12:37 a.m.