segmentByHaarSeg.RawGenomicSignals: Segment copy numbers using the HaarSeg method

In aroma.core: Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework

Segment copy numbers using the HaarSeg method

Description

Segment copy numbers using the HaarSeg method of the HaarSeg package.

Usage

## S3 method for class 'RawGenomicSignals'
segmentByHaarSeg(this, ..., cache=FALSE, force=FALSE, verbose=FALSE)

Arguments

...	Additional arguments passed to the segmentation function.
verbose	See Verbose.

Details

Internally haarSeg() of the HaarSeg is used to segment the signals. This segmentation method support weighted segmentation.

Value

Returns the fit object.

Author(s)

Henrik Bengtsson

See Also

For more information see RawGenomicSignals.

aroma.core documentation built on Nov. 16, 2022, 1:07 a.m.