Contains functions for autologistic variable selection and parameter estimation for spatially correlated categorical data (including k>2). The main function is MPLE. Capable of fitting the centered autologistic model described in Caragea and Kaiser (2009)
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| Author | Stephen Berg [aut, cre], Rao Fu [aut], Jun Zhu [ths] |
| Date of publication | 2016-10-05 09:29:49 |
| Maintainer | Stephen Berg <saberg2@wisc.edu> |
| License | GPL-2 | GPL-3 |
| Version | 1.0.0 |
| Package repository | View on CRAN |
| Installation | Install the latest version of this package by entering the following in R:
|
Functions | |
|---|---|
| JMatrixCentered | Man page Source code |
| JMatrixUncentered | Man page Source code |
| MPLE | Man page Source code |
| MPLEinternal | Man page Source code |
| adjMat | Man page Source code |
| boundaryIndices | Source code |
| centeredLogLikGrad | Man page Source code |
| centeredLogLikHess | Man page Source code |
| centeredLogLikelihood | Man page Source code |
| chol_psd | Man page Source code |
| criterionFit | Man page Source code |
| expSumGradient | Source code |
| expSumHessian | Source code |
| getArrayInd | Source code |
| getVecInd | Source code |
| indsFunction | Man page Source code |
| logLikelihood | Man page Source code |
| multProb | Man page Source code |
| multinomialBCD | Man page Source code |
| plotGrid | Man page Source code |
| rowPvalues | Source code |
| sandwichVariance | Man page Source code |
| significanceTest | Man page Source code |
| simulateData | Man page Source code |
| slotUpper_to_slotLower | Source code |
| toConstraint | Source code |
| toConstraintDerivative | Source code |
| totalX | Man page Source code |
| traceGrad | Source code |
| traceHessian | Source code |
| unStandardize | Man page Source code |
| uncenteredLogLikGrad | Man page Source code |
| uncenteredLogLikHess | Man page Source code |
| varianceTransformation | Source code |
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