automultinomial: Autologistic and Automultinomial Spatial Regression and Variable Selection

Contains functions for autologistic variable selection and parameter estimation for spatially correlated categorical data (including k>2). The main function is MPLE. Capable of fitting the centered autologistic model described in Caragea and Kaiser (2009)<doi:10.1198/jabes.2009.07032>, as well as the traditional autologistic model of Besag (1974)<http://www.jstor.org/stable/2984812>.

AuthorStephen Berg [aut, cre], Rao Fu [aut], Jun Zhu [ths]
Date of publication2016-10-05 09:29:49
MaintainerStephen Berg <saberg2@wisc.edu>
LicenseGPL-2 | GPL-3
Version1.0.0

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Files in this package

automultinomial
automultinomial/tests
automultinomial/tests/tests_Sub
automultinomial/tests/tests_Sub/testthat.R
automultinomial/NAMESPACE
automultinomial/R
automultinomial/R/totalX.R automultinomial/R/logLikelihood.R automultinomial/R/plotGrid.R automultinomial/R/sourceFunction.R automultinomial/R/significanceTest.R automultinomial/R/centeredGradient.R automultinomial/R/JMatrixUncentered.R automultinomial/R/centeredHessian.R automultinomial/R/multinomialGradient.R automultinomial/R/multinomialBCD.R automultinomial/R/MPLEinternal.R automultinomial/R/indsFunction.R automultinomial/R/criterionFit.R automultinomial/R/multProb.R automultinomial/R/unStandardize.R automultinomial/R/sandwichVariance.R automultinomial/R/chol_psd.R automultinomial/R/adjMat.R automultinomial/R/MPLE.R automultinomial/R/centeredLogLikelihood.R automultinomial/R/simulateData.R automultinomial/R/multinomialHessian.R automultinomial/R/JMatrixCentered.R
automultinomial/MD5
automultinomial/DESCRIPTION
automultinomial/man
automultinomial/man/uncenteredLogLikGrad.Rd automultinomial/man/totalX.Rd automultinomial/man/MPLEinternal.Rd automultinomial/man/uncenteredLogLikHess.Rd automultinomial/man/indsFunction.Rd automultinomial/man/centeredLogLikelihood.Rd automultinomial/man/JMatrixUncentered.Rd automultinomial/man/plotGrid.Rd automultinomial/man/sandwichVariance.Rd automultinomial/man/MPLE.Rd automultinomial/man/multinomialBCD.Rd automultinomial/man/unStandardize.Rd automultinomial/man/adjMat.Rd automultinomial/man/centeredLogLikHess.Rd automultinomial/man/multProb.Rd automultinomial/man/chol_psd.Rd automultinomial/man/centeredLogLikGrad.Rd automultinomial/man/logLikelihood.Rd automultinomial/man/significanceTest.Rd automultinomial/man/simulateData.Rd automultinomial/man/criterionFit.Rd automultinomial/man/JMatrixCentered.Rd

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