automultinomial: Autologistic and Automultinomial Spatial Regression and Variable Selection

Contains functions for autologistic variable selection and parameter estimation for spatially correlated categorical data (including k>2). The main function is MPLE. Capable of fitting the centered autologistic model described in Caragea and Kaiser (2009)<doi:10.1198/jabes.2009.07032>, as well as the traditional autologistic model of Besag (1974)<http://www.jstor.org/stable/2984812>.

AuthorStephen Berg [aut, cre], Rao Fu [aut], Jun Zhu [ths]
Date of publication2016-10-05 09:29:49
MaintainerStephen Berg <saberg2@wisc.edu>
LicenseGPL-2 | GPL-3
Version1.0.0

View on CRAN

Functions

adjMat Man page
centeredLogLikelihood Man page
centeredLogLikGrad Man page
centeredLogLikHess Man page
chol_psd Man page
criterionFit Man page
indsFunction Man page
JMatrixCentered Man page
JMatrixUncentered Man page
logLikelihood Man page
MPLE Man page
MPLEinternal Man page
multinomialBCD Man page
multProb Man page
plotGrid Man page
sandwichVariance Man page
significanceTest Man page
simulateData Man page
totalX Man page
uncenteredLogLikGrad Man page
uncenteredLogLikHess Man page
unStandardize Man page

Files

automultinomial
automultinomial/tests
automultinomial/tests/tests_Sub
automultinomial/tests/tests_Sub/testthat.R
automultinomial/NAMESPACE
automultinomial/R
automultinomial/R/totalX.R automultinomial/R/logLikelihood.R automultinomial/R/plotGrid.R automultinomial/R/sourceFunction.R automultinomial/R/significanceTest.R automultinomial/R/centeredGradient.R automultinomial/R/JMatrixUncentered.R automultinomial/R/centeredHessian.R automultinomial/R/multinomialGradient.R automultinomial/R/multinomialBCD.R automultinomial/R/MPLEinternal.R automultinomial/R/indsFunction.R automultinomial/R/criterionFit.R automultinomial/R/multProb.R automultinomial/R/unStandardize.R automultinomial/R/sandwichVariance.R automultinomial/R/chol_psd.R automultinomial/R/adjMat.R automultinomial/R/MPLE.R automultinomial/R/centeredLogLikelihood.R automultinomial/R/simulateData.R automultinomial/R/multinomialHessian.R automultinomial/R/JMatrixCentered.R
automultinomial/MD5
automultinomial/DESCRIPTION
automultinomial/man
automultinomial/man/uncenteredLogLikGrad.Rd automultinomial/man/totalX.Rd automultinomial/man/MPLEinternal.Rd automultinomial/man/uncenteredLogLikHess.Rd automultinomial/man/indsFunction.Rd automultinomial/man/centeredLogLikelihood.Rd automultinomial/man/JMatrixUncentered.Rd automultinomial/man/plotGrid.Rd automultinomial/man/sandwichVariance.Rd automultinomial/man/MPLE.Rd automultinomial/man/multinomialBCD.Rd automultinomial/man/unStandardize.Rd automultinomial/man/adjMat.Rd automultinomial/man/centeredLogLikHess.Rd automultinomial/man/multProb.Rd automultinomial/man/chol_psd.Rd automultinomial/man/centeredLogLikGrad.Rd automultinomial/man/logLikelihood.Rd automultinomial/man/significanceTest.Rd automultinomial/man/simulateData.Rd automultinomial/man/criterionFit.Rd automultinomial/man/JMatrixCentered.Rd

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