API for baseq
Basic Sequence Processing Tool for Biological Data

Global functions
as_Biostrings	Man page Source code
as_baseq_dna	Man page Source code
as_baseq_rna	Man page Source code
calculate_assembly_stats	Man page Source code
calculate_charge	Man page Source code
calculate_codon_usage	Man page Source code
calculate_identity	Man page Source code
calculate_mw	Man page Source code
calculate_pi	Man page Source code
calculate_tm	Man page Source code
clean_file	Man page Source code
clean_seq	Man page Source code
count_bases	Man page Source code
count_kmers	Man page Source code
count_pattern	Man page Source code
dna_to_protein	Man page Source code
dna_to_rna	Man page Source code
fastq_to_fasta	Man page Source code
filter_fastq_quality	Man page Source code
find_cpg_islands	Man page Source code
find_longest_orf	Man page Source code
gc_content	Man page Source code
get_genetic_code	Man page Source code
plot_aa_composition	Man page Source code
plot_dotplot	Man page Source code
plot_gc_skew	Man page Source code
plot_hydrophobicity	Man page Source code
print.baseq_dna	Source code
print.baseq_rna	Source code
read_seq	Man page Source code
rev_comp	Man page Source code
reverse_translate	Man page Source code
rna_to_dna	Man page Source code
rna_to_protein	Man page Source code
sars_fragment	Man page
search_motif	Man page Source code
shuffle_sequence	Man page Source code
simulate_digestion	Man page Source code
simulate_fasta	Man page Source code
simulate_fastq	Man page Source code
simulate_pcr	Man page Source code
simulate_sequence	Man page Source code
summarize_fasta	Man page Source code
translate	Man page Source code
translate.baseq_dna	Source code
translate.baseq_rna	Source code
translate.default	Source code
write_seq	Man page Source code