calculate_assembly_stats: Assembly Stats
In baseq: Basic Sequence Processing Tool for Biological Data
calculate_assembly_stats R Documentation
Assembly Stats
Description
Computes N50, L50, and other assembly statistics.
Usage
calculate_assembly_stats(seqs)
Arguments
seqs
A character vector or list of sequences (contigs)
Value
A named numeric vector of statistics
Examples
contigs <- c("ATGC", "ATGCATGC", "ATGCATGCATGC")
calculate_assembly_stats(contigs)
baseq documentation built on March 12, 2026, 1:07 a.m.
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| calculate_assembly_stats | R Documentation |
Assembly Stats
Description
Computes N50, L50, and other assembly statistics.
Usage
calculate_assembly_stats(seqs)
Arguments
seqs |
A character vector or list of sequences (contigs) |
Value
A named numeric vector of statistics
Examples
contigs <- c("ATGC", "ATGCATGC", "ATGCATGCATGC")
calculate_assembly_stats(contigs)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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