Description Usage Arguments Value
View source: R/LDA_gibbs_functions.R
This function samples the latent z parameter within the Gibbs sampler.
Calls on the SampleZAgg
function written in C++. Not for calling
directly by users.
1 | sample.z(ntsegm, nbins, y, nmaxclust, phi, ltheta, zeroes, ndata.types)
|
ntsegm |
numeric. The total number of time segments from all animal IDs. |
nbins |
numeric. A vector of the number of bins used to discretize each
movement variable. These must be in the same order as the columns within
|
y |
A list where each element stores separate aggregated count data per bin per time segment for each movement variable being analyzed. These are stored as matrices. |
nmaxclust |
numeric. A single number indicating the maximum number of clusters to test. |
phi |
A list where each element stores separate proportions per bin per time segment for each movement variable. |
ltheta |
A matrix storing the log-transformed values from the
|
zeroes |
A list of arrays that contain only zero values which are three dimensional (ntsegm,nbins[i],nmaxclust). |
ndata.types |
numeric. The number of data streams being analyzed. |
A list with estimates for z where the number of elements is equal to the number of movement variables.
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