exanet: Example gene regulatory network for testing purposes only

In bc3net: Gene Regulatory Network Inference with Bc3net

Description

The network consists of 814 genes and 1,103 interactions.

Usage

  data(exanet)

Format

An undirected weighted igraph object with 814 vertices and 1,103 egdges.

References

de Matos Simoes R, Emmert-Streib F., "Bagging statistical network inference from large-scale gene expression data" PLoS One. 2012;7(3):e33624. Epub 2012 Mar 30. PubMed PMID: 22479422; PubMed Central PMCID: PMC3316596.

Examples

  data(expmat)

Example output

Loading required package: c3net
Loading required package: igraph

Attaching package: 'igraph'

The following objects are masked from 'package:stats':

    decompose, spectrum

The following object is masked from 'package:base':

    union

Loading required package: infotheo
Loading required package: Matrix
Loading required package: lattice

bc3net documentation built on May 2, 2019, 2:12 p.m.