coriell: Array CGH data set of Coriell cell lines

In bcp: Bayesian Analysis of Change Point Problems

Description

These are two data array CGH studies of Coriell cell lines taken from the reference below.

Usage

coriell

Format

A data frame containing five variables: first is clone name, second is clone chromosome, third is clone position, fourth and fifth are log2ratio for two cell lines.

Source

http://www.nature.com/ng/journal/v29/n3/full/ng754.html

References

1. Olshen, A. B., Venkatraman, E. S., Lucito, R., Wigler, M. (2004), Circular binary segmentation for the analysis of array-based DNA copy number data, Biostatistics, 5, 557-572. url: http://www.bioconductor.org/packages/release/bioc/html/DNAcopy.html.

2. Snijders et al. (2001), Assembly of microarrays for genome-wide measurement of DNA copy number, Nature Genetics, 29, 263-264.

Examples

demo(coriell)

bcp documentation built on May 2, 2019, 9:16 a.m.