Man pages for beadplexr
Analysis of Multiplex Cytometric Bead Assays

apply_compensationApply compensation
approx_adjustApproximate bandwidth adjustment.
as_data_frame_analyteCast list of analytes to 'data.frame'
as_data_frame_flow_frameCast 'flowFrame' to 'data_frame'.
assign_analyte_idAssign analyte ID
calc_analyte_mfiCalculate the analyte intensity
calc_centreCalculate population center
calc_dist_to_centreCalculate euclidean distance between two points.
calc_std_concCalculate standard concentration
calculate_concentrationCalculate concentration.
cluster_eventsClustering with trimming
density_cutDensity cut.
despeckleDespeckle parameters
dist_chebyshevChebyshev distance
do_find_turning_pointsFind turning points
facs_plotPlot FACS data.
fit_standard_curveFit a standard curve
geometric_meanCalculate geometric mean
get_col_names_argsGet column names from the method arguments
harmonic_meanCalculate harmonic mean
ident_bead_popIdentify bead populations
identify_analyteIdentify analyte
identify_assay_analyteIdentify multiplex assay analytes
load_panelLoad panel information
lplexLEGENDplex example data
panel_name_fileGet file name from panel name
plot_concentrationsPlot concentrations
read_fcsRead a fcs file.
remove_boundary_eventsRemove boundary events.
simplexSimulated beadplex data
subset_channelsSubset channels
transform_bead_channelsTransform parameters with bead events.
trim_populationTrim cluster.
turning_pointTurning points
beadplexr documentation built on Dec. 8, 2018, 1:04 a.m.