create_treelog: Create a 'treelog' object

In beautier: 'BEAUti' from R

Create a treelog object

Description

Create a treelog object

Usage

create_treelog(
  filename = "$(tree).trees",
  log_every = 1000,
  mode = "tree",
  sanitise_headers = FALSE,
  sort = "none"
)

Arguments

filename	name of the file to store the posterior trees
log_every	number of MCMC states between writing to file
mode	mode how to log. Valid values are the ones returned by get_log_modes
sanitise_headers	set to TRUE to sanitise the headers of the log file
sort	how to sort the log. Valid values are the ones returned by get_log_sorts

Value

a 'treelog', as can be checked by check_treelog

Author(s)

Richèl J.C. Bilderbeek

Examples

check_empty_beautier_folder()

create_treelog()

check_empty_beautier_folder()

beautier documentation built on Nov. 2, 2023, 5:08 p.m.