read_taxa: Read and Validate Taxa Data
In benthos: Marine Benthic Ecosystem Analysis
read_taxa R Documentation
Read and Validate Taxa Data
Description
This function reads files in the taxa format.
Usage
read_taxa(filename)
get_taxa()
validate_taxa(.data)
Arguments
filename
name of taxa file
.data
table in taxa-format
Details
Taxa files have the following format:
- group
taxonomic group
- provided
provided taxon name
- accepted
accepted taxon name
- level
taxonomic level
Other columns are allowed, but silently ingored.
Functions
-
get_taxa(): get default taxa list (TWN list extended with species Southern North Sea)
-
validate_taxa(): validator for taxa-format
benthos documentation built on Aug. 8, 2025, 6:08 p.m.
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| read_taxa | R Documentation |
Read and Validate Taxa Data
Description
This function reads files in the taxa format.
Usage
read_taxa(filename)
get_taxa()
validate_taxa(.data)
Arguments
filename |
name of taxa file |
.data |
table in taxa-format |
Details
Taxa files have the following format:
- group
taxonomic group
- provided
provided taxon name
- accepted
accepted taxon name
- level
taxonomic level
Other columns are allowed, but silently ingored.
Functions
-
get_taxa(): get default taxa list (TWN list extended with species Southern North Sea) -
validate_taxa(): validator for taxa-format
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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