bfa: Bayesian Factor Analysis
Version 0.4

Provides model fitting for several Bayesian factor models including Gaussian, ordinal probit, mixed and semiparametric Gaussian copula factor models under a range of priors.

Browse man pages Browse package API and functions Browse package files

AuthorJared Murray
Date of publication2016-09-29 08:04:45
MaintainerJared Murray <jsmurray@stat.cmu.edu>
LicenseGPL-3
Version0.4
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("bfa")

Man pages

bfa_copula: Initialize and fit a Gaussian copula factor model
bfa_gauss: Initialize and fit a Gaussian factor model
bfa_mixed: Initialize and fit a mixed-scale Gaussian factor model, with...
bfa_model: Initialize a bfa model
bfa-package: Bayesian Factor Analysis
biplot.bfa: Display a biplot
coef.bfa: Extract samples of implied regression coefficients from a bfa...
cor_samp: Compute samples of the correlation matrix
cov_samp: Compute samples of the covariance matrix
get_coda: Get coda object
get_posterior_loadings: Get posterior samples of factor loadings
get_posterior_scores: Get posterior samples of factor scores
HPDinterval.bfa: HPD intervals from a bfa object
mean.bfa: Extract posterior means from bfa object
predict.bfa: Posterior predictive and univariate conditional posterior...
print.bfa: Print method for bfa object
ratings08: Special Interest Group Ratings (2008)
utri_restrict: Upper triangular loadings restriction
var.bfa: Extract posterior variances from bfa object
woodbury: Invert the matrix lam*t(lam)+diag(u) via Woodbury identity

Functions

HPDinterval.bfa Man page Source code
MCMCstep Source code
bfa Source code
bfa-package Man page
bfa_copula Man page Source code
bfa_gauss Man page Source code
bfa_mixed Man page Source code
bfa_model Man page Source code
biplot.bfa Man page Source code
coef.bfa Man page Source code
cor_samp Man page Source code
cov_samp Man page Source code
fit Source code
fit_bfa Source code
get_coda Man page Source code
get_posterior_loadings Man page Source code
get_posterior_scores Man page Source code
mean.bfa Man page Source code
predict.bfa Man page Source code
print.bfa Man page Source code
ratings08 Man page
rtnorm Source code
rtnorm.slice Source code
unload Source code
updateRho Source code
updateScores Source code
updateSparseLoadings Source code
updateZ Source code
updateZcut Source code
utri_restrict Man page Source code
var.bfa Man page Source code
woodbury Man page Source code

Files

src
src/loadings_sparse.cpp
src/Makevars
src/main_mcmc.cpp
src/bfa_common.h
src/loadings.cpp
src/loadings_gdp.cpp
src/loadings_sparse.h
src/erl.cpp
src/erl.h
src/bfa_common.cpp
src/scores.h
src/imh.h
src/scores.cpp
src/loadings.h
src/loadings_gdp.h
src/imh.cpp
src/main_mcmc.h
src/Makevars.win
NAMESPACE
NEWS
data
data/ratings08.RData
R
R/rng.R
R/bfa_copula.R
R/wrappers.R
R/postproc.R
R/plots.R
R/bfa-package.R
R/get_coda.R
R/bfa_gauss.R
R/ratings08.R
R/class.R
R/bfa_mixed.R
R/main.R
MD5
DESCRIPTION
man
man/mean.bfa.Rd
man/print.bfa.Rd
man/get_posterior_scores.Rd
man/cov_samp.Rd
man/utri_restrict.Rd
man/bfa_model.Rd
man/ratings08.Rd
man/get_coda.Rd
man/bfa_gauss.Rd
man/var.bfa.Rd
man/coef.bfa.Rd
man/bfa_mixed.Rd
man/woodbury.Rd
man/HPDinterval.bfa.Rd
man/biplot.bfa.Rd
man/predict.bfa.Rd
man/get_posterior_loadings.Rd
man/cor_samp.Rd
man/bfa-package.Rd
man/bfa_copula.Rd
bfa documentation built on May 19, 2017, 10:59 a.m.