bibliospec: Reading Mass Spectrometric Search Results
Version 0.0.4

R class to access 'sqlite', 'BiblioSpec' generated, mass spectrometry search result files, containing detailed information about peptide spectra matches. Convert 'Mascot' '.dat' or e.g. 'comet' '.pep.xml' files with 'BiblioSpec' into 'sqlite' files and than access them with the 'CRAN' 'bibliospec' package to analyse with the R-packages 'specL' to generate spectra libraries, 'protViz' to annotate spectra, or 'prozor' for false discovery rate estimation and protein inference.

Getting started

Package details

AuthorChristian Panse <[email protected]>, Witold E. Wolski <[email protected]>
Date of publication2016-07-01 10:57:25
MaintainerWitold E. Wolski <[email protected]>
LicenseGPL-3
Version0.0.4
URL https://github.com/protViz/bibliospec
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("bibliospec")

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bibliospec documentation built on May 29, 2017, 6:40 p.m.