bibliospec: Reading Mass Spectrometric Search Results

R class to access 'sqlite', 'BiblioSpec' generated, mass spectrometry search result files, containing detailed information about peptide spectra matches. Convert 'Mascot' '.dat' or e.g. 'comet' '.pep.xml' files with 'BiblioSpec' into 'sqlite' files and than access them with the 'CRAN' 'bibliospec' package to analyse with the R-packages 'specL' to generate spectra libraries, 'protViz' to annotate spectra, or 'prozor' for false discovery rate estimation and protein inference.

Getting started

Package details

AuthorChristian Panse <[email protected]>, Witold E. Wolski <[email protected]>
MaintainerWitold E. Wolski <[email protected]>
Package repositoryView on CRAN
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bibliospec documentation built on May 29, 2017, 6:40 p.m.