Description Usage Arguments Details Value Author(s) Examples
This function generate a heatmap (for numeric vector) or categorical plot (character vector) of multi well plate
1 |
datamatrix |
data in matrix format. An easy way to create this is by calling |
name |
name to be given for the heatmap |
size |
plot size for each well in the heatmap (default is 7.5) |
Heat map can be generated for any multi well plate data in matrix format (datamatrix). The columns and rows of datamatrix should be labelled appropriately using matrix96
. A heatplot is generated if datamatrix is numeric, but a categorical plot is generated if datamatrix is a character matrix.
A graphical plot.
A.A Palakkan
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 | ## loading data
data(metafile96, rawdata96,rawdata384)
rawdata96 <- data2plateformat(rawdata96,platetype = 96)
rawdata384 <- data2plateformat(rawdata384,platetype = 384)
## eg:1 heat map of rawdata96
data<-matrix96(plate2df(rawdata96),"value")
heatplate(data,"Plate 1", size=5)
## eg:2 heat map of rawdata96 can also be called as
heatplate(as.matrix(rawdata96),"Plate 1", size=5)
## eg:3 heat map of rawdata384
heatplate(as.matrix(rawdata384),"Plate 1", size=2)
## eg:4 catagorical map of metafile96 (column:id)
data<-matrix96(metafile96,"id")
heatplate(data,"Plate 1", size=5)
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