plate2df: Format Matrix Type 2D Data of Multi well Plate as Dataframe

In bioassays: Summarising Multi Well Plate Cellular Assay

Description

This function uses column names and row names of 'datamatrix' (2D data of a mutli well plate) and generate a dataframe with row, col (column) and position indices. The 'value' column represent corresponding value in the 'datamarix'.

Usage

plate2df(datamatrix)

Arguments

datamatrix

datamatrix is the 2D data of a mutli well plate. Usually the result of data2plateformat:

Value

A dataframe with 4 columns. Number of rows is equal to the number of wells (plate type of 'datamatrix'). The columns represent

row	Row number of the entry
col	Column number of the entry
position	Position (Row+column number) of the entry
value	Individual entries in the 'datamatrix'

Author(s)

A.A Palakkan

Examples

## loading data
data(rawdata24,rawdata96,rawdata384)

## eg:1 spectrophotometer reading from 24 well plate in dataframe format
datamatrix<- data2plateformat(rawdata24, platetype = 24)
head(plate2df(datamatrix))

## eg:2 spectrophotometer reading from 96 well plate in dataframe format
datamatrix<- data2plateformat(rawdata96, platetype = 96)
head(plate2df(datamatrix))

## eg:3 spectrophotometer reading from 384 well plate in dataframe format
datamatrix<- data2plateformat(rawdata384, platetype = 384)
head(plate2df(datamatrix))

bioassays documentation built on Oct. 23, 2020, 6:48 p.m.