edat: Species collection records dataset and environmental...

In biogeo: Point Data Quality Assessment and Coordinate Conversion

Description

A collection records for two insect species (Species T and Species U) containing common errors. The errors were inserted into the dataset to illustrate the use of the functions in the package. The dataset also contains values of 19 environmental variables.

Usage

data(edat)

Format

A data frame with 45 observations on the following 30 variables.

ID

a numeric vector - unique identifiers

Species

a character vector - species names

Country

a character vector - country of collection

x

a numeric vector - x-coordinate in decimal degrees

y

a numeric vector - y-coordinate in decimal degrees

LocalityName

a character vector - name of locality of collection

x_original

a logical vector - original x-coordinate

y_original

a logical vector - original y-coordinate

Correction

a character vector - a number associated with a particular correction

Modified

a character vector - date and time the record was modified

Exclude

a numeric vector - values of one indicate that the record should be excluded, zero if to be included

Reason

a character vector - indicates the reason for excluding the record

elev

a numeric vector - elevation in meters

bio1

a numeric vector - values for Annual Mean Temperature

bio10

a numeric vector - values for Mean Temperature of Warmest Quarter

bio11

a numeric vector - values for Mean Temperature of Coldest Quarter

bio12

a numeric vector - values for Annual Precipitation

bio13

a numeric vector - values for Precipitation of Wettest Month

bio14

a numeric vector - values for Precipitation of Driest Month

bio15

a numeric vector - values for Precipitation Seasonality

bio16

a numeric vector - values for Precipitation of Wettest Quarter

bio17

a numeric vector - values for Precipitation of Driest Quarter

bio18

a numeric vector - values for Precipitation of Warmest Quarter

bio19

a numeric vector - values for Precipitation of Coldest Quarter

bio2

a numeric vector - values for Mean Diurnal Range

bio3

a numeric vector - values for Isothermality

bio4

a numeric vector - values for Temperature seasonality

bio5

a numeric vector - values for Max Temperature of Warmest Month

bio6

a numeric vector - values for Min Temperature of Coldest Month

bio7

a numeric vector - values for Temperature Annual Range

bio8

a numeric vector - values for Mean Temperature of Wettest Quarter

bio9

a numeric vector - values for Mean Temperature of Driest Quarter

Details

values for these variables were obtained from Worldclim.org 10 minute spatial resolution bioclimatic data

Source

Environmental variable data obtained from Worldclim.org

Examples

data(edat)
head(edat)

Example output

       ID   Species      Country    x         y               LocalityName
1650 1950 Species T South Africa 23.5 -33.30000                 Willowmore
1651 1951 Species T South Africa 23.5 -33.30000                 Willowmore
1652 1952 Species T South Africa 23.5 -33.30000                 Willowmore
1653 1953 Species T South Africa 19.3 -31.46667 Nieuwoudtville 8 - 12km SE
1654 1954 Species T South Africa 19.3 -31.46667 Nieuwoudtville 8 - 12km SE
1655 1955 Species T South Africa 19.2 -31.21667   Brandkop, Nieuwoudtville
     x_original y_original Correction            Modified Exclude   Reason elev
1650         NA         NA   ........ 01-01-1900 12:01:01       0 ........ 2000
1651         NA         NA   ........ 01-01-1900 12:01:01       0 ........  900
1652         NA         NA   ........ 01-01-1900 12:01:01       0 ........  200
1653         NA         NA   ........ 01-01-1900 12:01:01       0 ........ 3201
1654         NA         NA   ........ 01-01-1900 12:01:01       0 ........  200
1655         NA         NA   ........ 01-01-1900 12:01:01       0 ........  489
     bio1 bio10 bio11 bio12 bio13 bio14 bio15 bio16 bio17 bio18 bio19 bio2 bio3
1650  161   214   104   364    48    16    31   127    58   111    58  139   52
1651  161   214   104   364    48    16    31   127    58   111    58  139   52
1652  161   214   104   364    48    16    31   127    58   111    58  139   52
1653  166   218   109   275    45     5    60   125    22    28   124  161   57
1654  166   218   109   275    45     5    60   125    22    28   124  161   57
1655  183   237   124   207    34     3    58    95    16    21    93  165   57
     bio4 bio5 bio6 bio7 bio8 bio9
1650 4295  295   31  264  212  104
1651 4295  295   31  264  212  104
1652 4295  295   31  264  212  104
1653 4309  313   33  280  116  218
1654 4309  313   33  280  116  218
1655 4433  333   44  289  131  236

biogeo documentation built on May 1, 2019, 8:05 p.m.