ramsort.integer64: Low-level intger64 methods for in-RAM sorting and ordering

In bit64: A S3 Class for Vectors of 64bit Integers

Low-level intger64 methods for in-RAM sorting and ordering

Description

Fast low-level methods for sorting and ordering. The ..sortorder methods do sorting and ordering at once, which requires more RAM than ordering but is (almost) as fast as as sorting.

Usage

## S3 method for class 'integer64'
shellsort(x, has.na=TRUE, na.last=FALSE, decreasing=FALSE, ...)
## S3 method for class 'integer64'
shellsortorder(x, i, has.na=TRUE, na.last=FALSE, decreasing=FALSE, ...)
## S3 method for class 'integer64'
shellorder(x, i, has.na=TRUE, na.last=FALSE, decreasing=FALSE, ...)
## S3 method for class 'integer64'
mergesort(x, has.na=TRUE, na.last=FALSE, decreasing=FALSE, ...)
## S3 method for class 'integer64'
mergeorder(x, i, has.na=TRUE, na.last=FALSE, decreasing=FALSE, ...)
## S3 method for class 'integer64'
mergesortorder(x, i, has.na=TRUE, na.last=FALSE, decreasing=FALSE, ...)
## S3 method for class 'integer64'
quicksort(x, has.na=TRUE, na.last=FALSE, decreasing=FALSE
, restlevel=floor(1.5*log2(length(x))), ...)
## S3 method for class 'integer64'
quicksortorder(x, i, has.na=TRUE, na.last=FALSE, decreasing=FALSE
, restlevel=floor(1.5*log2(length(x))), ...)
## S3 method for class 'integer64'
quickorder(x, i, has.na=TRUE, na.last=FALSE, decreasing=FALSE
, restlevel=floor(1.5*log2(length(x))), ...)
## S3 method for class 'integer64'
radixsort(x, has.na=TRUE, na.last=FALSE, decreasing=FALSE, radixbits=8L, ...)
## S3 method for class 'integer64'
radixsortorder(x, i, has.na=TRUE, na.last=FALSE, decreasing=FALSE, radixbits=8L, ...)
## S3 method for class 'integer64'
radixorder(x, i, has.na=TRUE, na.last=FALSE, decreasing=FALSE, radixbits=8L, ...)
## S3 method for class 'integer64'
ramsort(x, has.na = TRUE, na.last=FALSE, decreasing = FALSE, stable = TRUE
, optimize = c("time", "memory"), VERBOSE = FALSE, ...)
## S3 method for class 'integer64'
ramsortorder(x, i, has.na = TRUE, na.last=FALSE, decreasing = FALSE, stable = TRUE
, optimize = c("time", "memory"), VERBOSE = FALSE, ...)
## S3 method for class 'integer64'
ramorder(x, i, has.na = TRUE, na.last=FALSE, decreasing = FALSE, stable = TRUE
, optimize = c("time", "memory"), VERBOSE = FALSE, ...)

Arguments

x	a vector to be sorted by ramsort.integer64 and ramsortorder.integer64, i.e. the output of sort.integer64
i	integer positions to be modified by ramorder.integer64 and ramsortorder.integer64, default is 1:n, in this case the output is similar to order.integer64
has.na	boolean scalar defining whether the input vector might contain NAs. If we know we don't have NAs, this may speed-up. Note that you risk a crash if there are unexpected NAs with has.na=FALSE
na.last	boolean scalar telling ramsort whether to sort NAs last or first. Note that 'boolean' means that there is no third option NA as in sort
decreasing	boolean scalar telling ramsort whether to sort increasing or decreasing
stable	boolean scalar defining whether stable sorting is needed. Allowing non-stable may speed-up.
optimize	by default ramsort optimizes for 'time' which requires more RAM, set to 'memory' to minimize RAM requirements and sacrifice speed
restlevel	number of remaining recursionlevels before quicksort switches from recursing to shellsort
radixbits	size of radix in bits
VERBOSE	cat some info about chosen method
...	further arguments, passed from generics, ignored in methods

Details

see ramsort

Value

These functions return the number of NAs found or assumed during sorting

Note

Note that these methods purposely violate the functional programming paradigm: they are called for the side-effect of changing some of their arguments. The sort-methods change x, the order-methods change i, and the sortoder-methods change both x and i

Author(s)

Jens Oehlschlägel <[e-mail]>

See Also

ramsort for the generic, ramsort.default for the methods provided by package ff, sort.integer64 for the sort interface and sortcache for caching the work of sorting

Examples

  x <- as.integer64(sample(c(rep(NA, 9), 1:9), 32, TRUE))
  x
  message("ramsort example")
  s <- clone(x)
  ramsort(s)
  message("s has been changed in-place - whether or not ramsort uses an in-place algorithm")
  s
  message("ramorder example")
  s <- clone(x)
  o <- seq_along(s)
  ramorder(s, o)
  message("o has been changed in-place - s remains unchanged")
  s
  o
  s[o]
  message("ramsortorder example")
  o <- seq_along(s)
  ramsortorder(s, o)
  message("s and o have both been changed in-place - this is much faster")
  s
  o

bit64 documentation built on Sept. 30, 2024, 9:23 a.m.