Man pages for bitrugs
Bayesian Inference of Transmission Routes Using Genome Sequences

bitrugs-internalInternal functions
bitrugs-packageBayesian Inference of Transmission Routes Using Genome...
hospitaldataExample hospital data
mcmcoutputExample MCMC output
plot_transnetworkPlot transmission networks
simulate_dataNosocomial transmission data simulation
simulate_data_datesNosocomial transmission data simulation with fixed dates.
traceplotsCreate MCMC trace plots
translinksCalculate tree distance
transmission_analysisEstimate transmission dynamics and parameters
bitrugs documentation built on May 2, 2019, 8:55 a.m.