bitrugs-internal | Internal functions |
bitrugs-package | Bayesian Inference of Transmission Routes Using Genome... |
hospitaldata | Example hospital data |
mcmcoutput | Example MCMC output |
plot_transnetwork | Plot transmission networks |
simulate_data | Nosocomial transmission data simulation |
simulate_data_dates | Nosocomial transmission data simulation with fixed dates. |
traceplots | Create MCMC trace plots |
translinks | Calculate tree distance |
transmission_analysis | Estimate transmission dynamics and parameters |
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