bkmr: Bayesian Kernel Machine Regression

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Implementation of a statistical approach for estimating the joint health effects of multiple concurrent exposures.

Author
Jennifer F. Bobb [aut, cre]
Date of publication
2016-07-01 10:57:27
Maintainer
Jennifer F. Bobb <jenniferfederbobb@gmail.com>
License
GPL-2
Version
0.1.0
URLs

View on CRAN

Man pages

CalcGroupPIPs
Calculate group-specific posterior inclusion probabilities
CalcPIPs
Calculate variable-specific posterior inclusion probabilities
CalcWithinGroupPIPs
Calculate conditional predictor specific posterior inclusion...
ComputePostmeanHnew
Compute the posterior mean and variance of 'h' at a new...
ExtractEsts
Extract summary statistics
ExtractPIPs
Extract posterior inclusion probabilities (PIPs) from BKMR...
ExtractSamps
Extract samples
InvestigatePrior
Investigate prior
kmbayes
Fit Bayesian kernel machine regression
OverallRiskSummaries
Calculate overall risk summaries
PlotPriorFits
Plot of exposure-response function from univariate KMR fot
PredictorResponseBivar
Predict the exposure-response function at a new grid of...
PredictorResponseBivarLevels
Plot cross-sections of the bivariate predictor-response...
PredictorResponseUnivar
Plot univariate predictor-response function on a new grid of...
set_verbose_opts
Options for printing summary of model fit to the console
SimData
Simulate dataset
SingVarIntSummaries
Single Variable Interaction Summaries
SingVarRiskSummaries
Single Variable Risk Summaries
SummarySamps
Compute summary statistics
TracePlot
Trace plot

Files in this package

bkmr
bkmr/NAMESPACE
bkmr/R
bkmr/R/PredictorResponseFunctions.R
bkmr/R/TracePlot.R
bkmr/R/base.r
bkmr/R/CalcR2.R
bkmr/R/argval_ListInput.R
bkmr/R/bkmr_r_parameter_helper_functions.R
bkmr/R/ExtractEsts.R
bkmr/R/bkmr_parameter_update_functions.R
bkmr/R/print_verbose.R
bkmr/R/SimData.R
bkmr/R/ComputePostmeanHnew.R
bkmr/R/ComputeMixtureSummaries.R
bkmr/R/argval_controlParams.R
bkmr/R/bkmr_main_functions.R
bkmr/R/InvestigatePrior_rm.R
bkmr/R/CalcPIPs.R
bkmr/R/argval_ParamInput.R
bkmr/R/zzz.R
bkmr/MD5
bkmr/DESCRIPTION
bkmr/man
bkmr/man/PlotPriorFits.Rd
bkmr/man/SingVarRiskSummaries.Rd
bkmr/man/SimData.Rd
bkmr/man/kmbayes.Rd
bkmr/man/PredictorResponseBivarLevels.Rd
bkmr/man/CalcGroupPIPs.Rd
bkmr/man/InvestigatePrior.Rd
bkmr/man/SingVarIntSummaries.Rd
bkmr/man/ExtractPIPs.Rd
bkmr/man/CalcWithinGroupPIPs.Rd
bkmr/man/ComputePostmeanHnew.Rd
bkmr/man/ExtractEsts.Rd
bkmr/man/CalcPIPs.Rd
bkmr/man/PredictorResponseUnivar.Rd
bkmr/man/PredictorResponseBivar.Rd
bkmr/man/ExtractSamps.Rd
bkmr/man/SummarySamps.Rd
bkmr/man/TracePlot.Rd
bkmr/man/OverallRiskSummaries.Rd
bkmr/man/set_verbose_opts.Rd