Extract posterior inclusion probabilities (PIPs) from BKMR model fit

Share:

Description

Extract posterior inclusion probabilities (PIPs) from Bayesian Kernel Machine Regression (BKMR) model fit

Usage

1
ExtractPIPs(fit, sel = NULL, z.names = NULL)

Arguments

fit

An object containing the results returned by a the kmbayes function

sel

logical expression indicating samples to keep; defaults to keeping the second half of all samples

z.names

optional argument providing the names of the variables included in the h function.

Value

a data frame with the variable-specific PIPs for BKMR fit with component-wise variable selection, and with the group-specific and conditional (within-group) PIPs for BKMR fit with hierarchical variable selection.