blaster: Native R Implementation of an Efficient BLAST-Like Algorithm

Implementation of an efficient BLAST-like sequence comparison algorithm, written in C++11 and using native R datatypes. Blaster is based on 'nsearch' - Schmid et al 2018; <doi:10.1101/399782>.

Getting started

Package details

AuthorManu Tamminen [aut, cre] (<>), Timothy Julian [aut] (<>), Steven Schmid [aut]
MaintainerManu Tamminen <>
LicenseBSD_3_clause + file LICENSE
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:

Try the blaster package in your browser

Any scripts or data that you put into this service are public.

blaster documentation built on March 8, 2021, 1:14 a.m.