Files in blaster
Native R Implementation of an Efficient BLAST-Like Algorithm

MD5
README.md
NAMESPACE
DESCRIPTION
LICENSE
R/RcppExports.R R/blaster.R
src/SequenceWriter.h
src/Sequence.h
src/SequenceReader.h
src/RcppExports.cpp
src/Common.h
src/Alphabet.h
src/Blast.cpp
src/TextReader.cpp
src/ReadFasta.cpp
src/Utils.h
src/WorkerQueue.h
src/Search.h
src/TextReader.h
src/Database.h
src/FileFormat.h
src/Database/HSP.h
src/Database/Search.h
src/Database/GlobalSearch.h
src/Database/Highscore.h
src/Database/Kmers.h
src/Database/HitWriter.h
src/FASTQ/QScore.h
src/FASTQ/Writer.h
src/FASTQ/Reader.h
src/Alignment/Common.h
src/Alignment/BandedAlign.h
src/Alignment/ExtendAlign.h
src/Alignment/SegmentPair.h
src/Alignment/Cigar.h
src/Alphabet/DNA.h
src/Alphabet/Protein.h
src/PairedEnd/Merger.h
src/PairedEnd/Reader.h
src/CSV/Writer.h
src/FASTA/Writer.h
src/FASTA/Reader.h
src/Alnout/Writer.h
inst/extdata/query.fasta
inst/extdata/prot.fasta
inst/extdata/db.fasta
man/read_fasta.Rd man/blast.Rd man/blaster.Rd
blaster documentation built on March 8, 2021, 1:14 a.m.