API for blisa
Infer Cell-Cell Communication from Spatial Transcriptomics
| Global functions | |
|---|---|
| .combine_pvals | Source code |
| .estimateSpotPitch | Source code |
| .load_cellchat_db | Source code |
| .norm_units | Source code |
| .resolve_lr_index | Source code |
| LR_df_add_mode | Source code |
| blisa | Man page Source code |
| blisa-package | Man page |
| blisa.SpatialExperiment | Man page Source code |
| blisa.default | Man page Source code |
| blisaPathway | Man page Source code |
| computeSpatialWeights | Man page Source code |
| filterLRpairs | Man page Source code |
| filter_genes | Source code |
| getLRpairs | Source code |
| get_min_expr | Source code |
| hexBinCells | Man page Source code |
| is.blisa | Man page Source code |
| make_lr_id | Source code |
| new_blisa | Man page Source code |
| parse_units | Source code |
| plotCCI | Man page Source code |
| plotCCI.blisa | Man page Source code |
| plotCCI.default | Man page Source code |
| plotCCILR | Man page Source code |
| plotCCILR.blisa | Man page Source code |
| plotCCILR.default | Man page Source code |
| plotCCIspatial | Man page Source code |
| plotCCIsummary | Man page Source code |
| plotCCIsummary.blisa | Man page Source code |
| plotCCIsummary.default | Man page Source code |
| plotHotspots | Man page Source code |
| plotHotspots.blisa | Man page Source code |
| plotLRrank | Man page Source code |
| plotLRrank.blisa | Man page Source code |
| plotLRrank.data.frame | Man page Source code |
| print.blisa | Source code |
| runCCI | Man page Source code |
| runCCI.blisa | Man page Source code |
| runCCI.default | Man page Source code |
| visiumSpotBins | Man page Source code |
