Description Usage Arguments Author(s) References

Simulates a GGM as described by Yin and Li (2011), using the Watts and Strogatz (1998) algorithm for generating the graph structure (see `watts.strogatz.game`

).

1 2 |

`Nvar` |
Number of nodes |

`p` |
Rewiring probability if graph = "smallworld" or "cluster", or connection probability if graph = "random". If cluster, can add multiple p's for each cluster, e.g., "c(.1, .5)" |

`nei` |
Neighborhood (see |

`parRange` |
Range of partial correlation coefficients to be originally sampled. |

`constant` |
A constant as described by Yin and Li (2011). |

`propPositive` |
Proportion of edges to be set positive. |

`clusters` |
Number of clusters if graph = "cluster" |

`graph` |
Type of graph to simulate |

Sacha Epskamp <[email protected]>

Yin, J., and Li, H. (2011). A sparse conditional gaussian graphical model for analysis of genetical genomics data. The annals of applied statistics, 5(4), 2630.

Watts, D. J., & Strogatz, S. H. (1998). Collective dynamics of ‘small-world’ networks. nature, 393(6684), 440-442.

bootnet documentation built on July 28, 2018, 9:03 a.m.

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