brr: Bayesian Inference on the Ratio of Two Poisson Rates
Version 1.0.0

Implementation of the Bayesian inference for the two independent Poisson samples model, using the semi-conjugate family of prior distributions.

Browse man pages Browse package API and functions Browse package files

AuthorStéphane Laurent
Date of publication2015-09-07 18:17:47
MaintainerStéphane Laurent <laurent_step@yahoo.fr>
LicenseGPL-2
Version1.0.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("brr")

Man pages

Beta2Dist: Beta distribution of the second kind
BNBDist: Beta-negative binomial distribution
Brr: Creation and summary of a 'brr' object
brr-package: Bayesian inference on the ratio of two Poisson rates
frequentist: Frequentist inference about the relative risk
GB2Dist: Gamma-Beta2 distribution
GIBDist: Gamma-Inverse Beta distribution
Inference: Inference summaries
inference_brr: Credibility intervals and estimates
intrinsic2_discrepancy: Second intrinsic discrepancy
Intrinsic2Inference: Intrinsic inference on the rates ratio based on the second...
intrinsic_discrepancy: Intrinsic discrepancy
IntrinsicInference: Intrinsic inference on the rate ratio.
PGB2Dist: Poisson-Gamma-Beta2 distribution
PGIBDist: Poisson-Gamma-Inverse Beta distribution
plot.brr: plot brr
Posterior_lambda: Posterior distribution on the incidence rate in the treated...
Posterior_mu: Posterior distribution on the rate in the control group
Posterior_phi: Posterior distribution on the relative risk and the vaccine...
Post_x: Posterior predictive distribution of the count in the treated...
Post_y: Posterior predictive distribution of the count in the control...
PriorAndPosterior: Prior and posterior distributions
Prior_lambda: Prior distribution on the incidence rate in the treated group
Prior_mu: Prior distribution on the rate in the control group
Prior_phi: Prior distribution on the relative risk and the vaccine...
Prior_x: Prior predictive distribution of the count in the treated...
Prior_x_given_y: Prior predictive distribution of the count x in the treated...
Prior_y: Prior predictive distribution of the count in the control...
summary_gamma: Summary of a Gamma distribution
summary_nbinom: Summary of a Negative Binomial distribution

Functions

BNBDist Man page
Beta2Dist Man page
Brr Man page Source code
FrequentistInference Man page
GB2Dist Man page
GIBDist Man page
Gauss2F1 Source code
Inference Man page
Intrinsic2Inference Man page
IntrinsicInference Man page
PGB2Dist Man page
PGIBDist Man page
Post_x Man page
Post_y Man page
Posterior_lambda Man page
Posterior_mu Man page
Posterior_phi Man page
PriorAndPosterior Man page
Prior_lambda Man page
Prior_mu Man page
Prior_phi Man page
Prior_x Man page
Prior_x_given_y Man page
Prior_y Man page
beta_integration_range Source code
brr Man page
brr-package Man page
brr_estimates Man page Source code
brr_generic Source code
brr_intervals Man page Source code
coef.brr Man page Source code
confint.brr Man page Source code
dGB2 Man page Source code
dGIB Man page Source code
dPGB2 Man page Source code
dPGIB Man page Source code
dbeta2 Man page Source code
dbeta_nbinom Man page Source code
dd_moment Source code
dpost Man page Source code
dpost_VE Man page Source code
dpost_lambda Man page Source code
dpost_mu Man page Source code
dpost_phi Man page Source code
dpost_x Man page Source code
dpost_y Man page Source code
dprior Man page Source code
dprior_VE Man page Source code
dprior_lambda Man page Source code
dprior_mu Man page Source code
dprior_phi Man page Source code
dprior_x Man page Source code
dprior_x_given_y Man page Source code
dprior_y Man page Source code
greek_utf8 Source code
icdf Source code
inference.brr Man page
intrinsic2_H0 Man page Source code
intrinsic2_bounds Man page Source code
intrinsic2_discrepancy Man page Source code
intrinsic2_estimate Man page Source code
intrinsic2_phi0 Man page Source code
intrinsic2_phi0_sims Man page Source code
intrinsic_H0 Man page Source code
intrinsic_bounds Man page Source code
intrinsic_discrepancy Man page Source code
intrinsic_estimate Man page Source code
intrinsic_phi0 Man page Source code
intrinsic_phi0_sims Man page Source code
moment_GB2 Man page Source code
pGB2 Man page Source code
pPGB2 Man page Source code
pPGIB Man page Source code
pbeta2 Man page Source code
pbeta_nbinom Man page Source code
plot.brr Man page Source code
ppost Man page Source code
ppost_VE Man page Source code
ppost_phi Man page Source code
ppost_x Man page Source code
ppost_y Man page Source code
pprior Man page Source code
pprior_VE Man page Source code
pprior_lambda Man page Source code
pprior_mu Man page Source code
pprior_phi Man page Source code
pprior_x Man page Source code
pprior_x_given_y Man page Source code
pprior_y Man page Source code
predict.brr Man page Source code
print.coef.brr Man page Source code
print.confint.brr Man page Source code
print.predict.brr Man page Source code
print.summary.brr Man page Source code
prior Source code
qGB2 Man page Source code
qPGB2 Man page Source code
qPGIB Man page Source code
qbeta2 Man page Source code
qbeta_nbinom Man page Source code
qpost Man page Source code
qpost_VE Man page Source code
qpost_phi Man page Source code
qpost_x Man page Source code
qpost_y Man page Source code
qprior Man page Source code
qprior_VE Man page Source code
qprior_mu Man page Source code
qprior_phi Man page Source code
qprior_x Man page Source code
qprior_x_given_y Man page Source code
qprior_y Man page Source code
rGB2 Man page Source code
rGIB Man page Source code
rPGB2 Man page Source code
rPGIB Man page Source code
rbeta2 Man page Source code
rbeta_nbinom Man page Source code
rho Source code
rpost Man page Source code
rpost_lambda Man page Source code
rpost_mu Man page Source code
rpost_phi Man page Source code
rpost_x Man page Source code
rpost_y Man page Source code
rprior Man page Source code
rprior_lambda Man page Source code
rprior_mu Man page Source code
rprior_phi Man page Source code
rprior_x Man page Source code
rprior_x_given_y Man page Source code
rprior_y Man page Source code
rr_interval_SK Man page Source code
rr_interval_binomial Man page Source code
rr_intervals Man page Source code
sbeta_nbinom Man page Source code
spost Man page Source code
spost_lambda Man page Source code
spost_mu Man page Source code
spost_phi Man page Source code
spost_x Man page Source code
spost_y Man page Source code
sprior Man page Source code
sprior_lambda Man page Source code
sprior_mu Man page Source code
sprior_phi Man page Source code
sprior_x Man page Source code
sprior_x_given_y Man page Source code
sprior_y Man page Source code
summary.brr Man page Source code
summary_GB2 Man page Source code
summary_GIB Man page Source code
summary_PGB2 Man page Source code
summary_PGIB Man page Source code
summary_beta2 Man page Source code
summary_beta_nbinom Man page Source code
summary_gamma Man page Source code
summary_nbinom Man page Source code

Files

inst
inst/doc
inst/doc/brr-paper_01.pdf.asis
inst/doc/brr-BasicUsage.pdf.asis
inst/doc/brr-paper_01.pdf
inst/doc/brr-BasicUsage.pdf
tests
tests/testthat.R
tests/testthat
tests/testthat/Rplots.pdf
tests/testthat/test-quantiles.R
tests/testthat/test-priors.R
tests/testthat/test-intrinsic.R
tests/testthat/test-miscellanous.R
tests/testthat/test-posteriors.R
tests/testthat/test-simulations.R
tests/testthat/test-inference.R
tests/testthat/test-distributions.R
tests/testthat/test-intrinsic2.R
tests/testthat/test-brr.R
NAMESPACE
R
R/predictive_prior.R
R/brr.R
R/intrinsic2.R
R/priors.R
R/frequentist.R
R/intrinsic.R
R/distributions.R
R/inference.R
R/misc.R
R/posteriors.R
R/predictive_posterior.R
vignettes
vignettes/brr-paper_01.pdf.asis
vignettes/brr-BasicUsage.pdf.asis
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/Inference.Rd
man/intrinsic_discrepancy.Rd
man/Posterior_lambda.Rd
man/summary_nbinom.Rd
man/PGB2Dist.Rd
man/Beta2Dist.Rd
man/Prior_y.Rd
man/Brr.Rd
man/BNBDist.Rd
man/Post_x.Rd
man/frequentist.Rd
man/intrinsic2_discrepancy.Rd
man/GIBDist.Rd
man/brr-package.Rd
man/Post_y.Rd
man/PGIBDist.Rd
man/Prior_x_given_y.Rd
man/Posterior_mu.Rd
man/Prior_x.Rd
man/Prior_lambda.Rd
man/inference_brr.Rd
man/summary_gamma.Rd
man/GB2Dist.Rd
man/Prior_phi.Rd
man/Intrinsic2Inference.Rd
man/IntrinsicInference.Rd
man/Posterior_phi.Rd
man/PriorAndPosterior.Rd
man/Prior_mu.Rd
man/plot.brr.Rd
brr documentation built on May 19, 2017, 12:59 p.m.