chop: Survival of CHOP for diffuse large B cell lymphoma
In bujar: Buckley-James Regression for Survival Data with High-Dimensional Covariates
chop R Documentation
Survival of CHOP for diffuse large B cell lymphoma
Description
Microarray data for DLBCL patients undergoing CHOP treatment.
Usage
data(chop)
Format
The format is:
num [1:181, 1:3835]
Details
Microarray data of DLBCL of 181 patients treated with a combination chemotherapy with cyclophosphamide, doxorubicin, vincristine
and prednisone (CHOP). The original data have 54675 probe sets or covariates. Due to the nature of high-dimensional data, a preselection procedure was conducted to filter out the genes with lower variations if a sample variance for a gene was smaller than the 10th percentile for that gene.
The first column if the survival times. The second column is an indicator whether an the survival time was observed or right censoring occurred. 0=alive, 1=dead. There are 3833 genes after the filtering process.
Source
Lenz, et al. (2008). Stromal gene signatures in large-B-cell lymphomas. New England Journal of Medicine,
359(22), 2313–2323
Examples
data(chop)
str(chop)
bujar documentation built on July 9, 2023, 7:23 p.m.
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| chop | R Documentation |
Survival of CHOP for diffuse large B cell lymphoma
Description
Microarray data for DLBCL patients undergoing CHOP treatment.
Usage
data(chop)Format
The format is: num [1:181, 1:3835]
Details
Microarray data of DLBCL of 181 patients treated with a combination chemotherapy with cyclophosphamide, doxorubicin, vincristine and prednisone (CHOP). The original data have 54675 probe sets or covariates. Due to the nature of high-dimensional data, a preselection procedure was conducted to filter out the genes with lower variations if a sample variance for a gene was smaller than the 10th percentile for that gene. The first column if the survival times. The second column is an indicator whether an the survival time was observed or right censoring occurred. 0=alive, 1=dead. There are 3833 genes after the filtering process.
Source
Lenz, et al. (2008). Stromal gene signatures in large-B-cell lymphomas. New England Journal of Medicine, 359(22), 2313–2323
Examples
data(chop)
str(chop)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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