phylocom | R Documentation |
Fictional data for testing purposes from Phylocom (Webb et al. 2008)
phylocom
A list with three elements:
Phylogeny with 32 tips
Community matrix with 6 sites (rows) and 25 species (columns).
Trait data; a data.frame with 32 species (rows) and 4 traits (columns)
Obtained via the picante
package (Kembel et al. 2010)
Webb, C.O., Ackerly, D.D., and Kembel, S.W. 2008. Phylocom: software for the analysis of phylogenetic community structure and trait evolution. Version 4.0.1. http://www.phylodiversity.net/phylocom/.
Kembel, et al. Picante: R tools for integrating phylogenies and ecology, Bioinformatics 26: 1463–1464 \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1093/bioinformatics/btq166")}
# Example phylogeny
phylocom$phy
# Example community
phylocom$comm
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