Fits models from Miller et al. 2005 to estimate population sizes from natural populations. Several models are implemented. Package also includes functions to perform a likelihood ratio test to choose between models, perform parametric bootstrapping to obtain confidence intervals and multiple functions to simulate data.

Author | Matthew W. Pennell and Craig R. Miller |

Date of publication | 2012-08-16 13:47:50 |

Maintainer | Matthew W. Pennell <mwpennell@gmail.com> |

License | GPL (>= 2) |

Version | 1.1.4 |

**bootstrapCapwire:** Parametric Bootstrap ECM and TIRM Models

**buildClassTable:** Convert capture counts to data frame with capture classes

**buildIndTable:** Convert capture counts to data frame with individuals

**capwire-package:** Estimate Population Size from Non-Invasive Sampling

**classToInd:** Convert a table of capture class data into a table of...

**drawCapRatesBeta:** Draw Capture Rates from Beta Distribution

**drawCapRatesExp:** Draw Capture Rates from Exponential Distribution

**drawCapRatesGamma:** Draw Capture Rates from Gamma Distribution

**drawCapRatesGeom:** Draw Capture Rates from Geometric Distribution

**drawCapRatesUnif:** Draw Capture Rates from Uniform Distribution

**fitEcm:** Fit Equal Capture Model (ECM)

**fitTirm:** Fit Two Innate Rates Model (TIRM)

**fitTirmPartition:** Fit the Two Innate Rates Model After Partiioning Data

**indToClass:** Convert a table of individuals into a table of class data

**lrtCapwire:** Likelihood Ratio Test Comparing TIRM to ECM

**partitionCountData:** Partition the Count Data

**simCapture:** Simulate data under various distributions of capture rates

**simEcm:** Simulate Data Under Equal Capture Model

**simTirm:** Simulate Data Under Two-Innate Rates Model

**wombat:** Wombat Capture Count Data

capwire

capwire/MD5

capwire/R

capwire/R/simTirm.R
capwire/R/simEcm.R
capwire/R/simCapture.R
capwire/R/partitionCountData.R
capwire/R/lrtCapwire.R
capwire/R/indToClass.R
capwire/R/fitTirmPartition.R
capwire/R/fitTirm.R
capwire/R/fitEcm.R
capwire/R/drawCapRatesUnif.R
capwire/R/drawCapRatesGeom.R
capwire/R/drawCapRatesGamma.R
capwire/R/drawCapRatesExp.R
capwire/R/drawCapRatesBeta.R
capwire/R/classToInd.R
capwire/R/capwire-internal.R
capwire/R/buildIndTable.R
capwire/R/buildClassTable.R
capwire/R/bootstrapCapwire.R
capwire/NAMESPACE

capwire/man

capwire/man/wombat.Rd
capwire/man/simTirm.Rd
capwire/man/simEcm.Rd
capwire/man/simCapture.Rd
capwire/man/partitionCountData.Rd
capwire/man/lrtCapwire.Rd
capwire/man/indToClass.Rd
capwire/man/fitTirmPartition.Rd
capwire/man/fitTirm.Rd
capwire/man/fitEcm.Rd
capwire/man/drawCapRatesUnif.Rd
capwire/man/drawCapRatesGeom.Rd
capwire/man/drawCapRatesGamma.Rd
capwire/man/drawCapRatesExp.Rd
capwire/man/drawCapRatesBeta.Rd
capwire/man/classToInd.Rd
capwire/man/capwire-package.Rd
capwire/man/buildIndTable.Rd
capwire/man/buildClassTable.Rd
capwire/man/bootstrapCapwire.Rd
capwire/DESCRIPTION

capwire/data

capwire/data/wombat.rda

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