API for causalDisco
Tools for Causal Discovery on Observational Data
| Global functions | |
|---|---|
| +.Knowledge | Man page |
| .add_edges | Source code |
| .build_knowledge_from_order | Source code |
| .check_if_pkgs_are_installed | Source code |
| .classify_binary | Source code |
| .decorate_test | Source code |
| .edge_verb | Source code |
| .f1_score_cm | Source code |
| .false_omission_rate_cm | Source code |
| .fdr_cm | Source code |
| .formula_vars | Source code |
| .g1_score_cm | Source code |
| .get_pcalg_test_from_string | Source code |
| .get_suff_stat | Source code |
| .make_runner_bnlearn | Source code |
| .make_runner_standard | Source code |
| .make_runner_tetrad | Source code |
| .make_tikz | Source code |
| .make_tikz_core | Source code |
| .new_knowledge | Source code |
| .npv_cm | Source code |
| .onAttach | Source code |
| .onLoad | Source code |
| .pcalg_constraints_from_knowledge | Source code |
| .precision_cm | Source code |
| .read_line | Source code |
| .recall_cm | Source code |
| .specificity_cm | Source code |
| .tier_index | Source code |
| .to_dm_0_based | Source code |
| .validate_forbidden_required | Source code |
| .validate_tier_rule | Source code |
| .vars_from_spec | Source code |
| BnlearnSearch | Man page |
| CausalDiscoSearch | Man page |
| PcalgSearch | Man page |
| TemporalBDeu | Man page |
| TemporalBDeu-class | Man page |
| TemporalBIC | Man page |
| TemporalBIC-class | Man page |
| TetradSearch | Man page |
| `$.Disco` | Source code |
| `$<-.Disco` | Source code |
| `%!-->%` | Source code |
| `%-->%` | Source code |
| `+.Knowledge` | Source code |
| `[[.Disco` | Source code |
| `[[<-.Disco` | Source code |
| add_exo | Man page |
| add_exogenous | Man page Source code |
| add_tier | Man page Source code |
| add_to_tier | Man page Source code |
| add_vars | Man page Source code |
| adj_confusion | Source code |
| adj_fn | Source code |
| adj_fp | Source code |
| adj_tn | Source code |
| adj_tp | Source code |
| aid | Man page |
| amat | Source code |
| as.graphNEL | Source code |
| as_bnlearn_knowledge | Man page Source code |
| as_disco | Source code |
| as_disco.EssGraph | Source code |
| as_disco.default | Source code |
| as_disco.fciAlgo | Source code |
| as_disco.pcAlgo | Source code |
| as_disco.tetrad_graph | Source code |
| as_pcalg_constraints | Man page Source code |
| as_tetrad_knowledge | Man page Source code |
| ask_heap_size | Source code |
| boss | Man page Source code |
| boss_fci | Man page Source code |
| build_node_lines | Source code |
| build_tikz_globals | Source code |
| cast_obj | Source code |
| cat_data | Man page |
| cat_data_mcar | Man page |
| cat_ord_data | Man page |
| causalDisco | Man page |
| causalDisco-package | Man page |
| check_args_and_distribute_args | Source code |
| check_args_and_distribute_args_bnlearn | Source code |
| check_args_and_distribute_args_causalDisco | Source code |
| check_args_and_distribute_args_pcalg | Source code |
| check_args_and_distribute_args_tetrad | Source code |
| check_edge_constraints | Source code |
| check_method_knowledge_bug | Source code |
| check_tier_violations | Source code |
| combine_knowledge_and_caugi | Source code |
| compute_global_color | Source code |
| confusion | Man page Source code |
| constraint_based_prepare_inputs | Source code |
| convert_tiers_to_forbidden | Man page Source code |
| cor_test | Man page Source code |
| create_adj_matrix_from_list | Source code |
| create_list_from_adj_matrix | Source code |
| current_heap_gb | Source code |
| default_heap | Source code |
| deparse_knowledge | Man page Source code |
| dir_confusion | Source code |
| dir_test | Source code |
| disco | Man page Source code |
| disco_algs_return_doc_dag | Man page |
| disco_algs_return_doc_pag | Man page |
| disco_algs_return_doc_pdag | Man page |
| disco_method | Source code |
| disco_note | Man page |
| distribute_engine_args | Man page Source code |
| edges | Source code |
| edges_amat | Source code |
| evaluate | Man page Source code |
| extract_edges | Source code |
| extract_nodes | Source code |
| f1_score | Man page Source code |
| false_omission_rate | Man page Source code |
| fast_iamb | Man page Source code |
| fci | Man page Source code |
| fdr | Man page Source code |
| find_adjacencies | Source code |
| forbid_edge | Man page Source code |
| forbid_tier_violations | Source code |
| format_coord | Source code |
| g1_score | Man page Source code |
| generate_dag_data | Man page Source code |
| ges | Man page Source code |
| get_anchor_and_offset | Source code |
| get_java_version | Source code |
| get_tetrad_dir | Source code |
| get_tiers | Man page Source code |
| gfci | Man page Source code |
| grasp | Man page Source code |
| grasp_fci | Man page Source code |
| gs | Man page Source code |
| halfskel | Source code |
| hc | Source code |
| hd | Man page |
| iamb | Man page Source code |
| iamb-family | Man page |
| iamb_fdr | Man page Source code |
| init_java | Source code |
| install_tetrad | Man page Source code |
| inter_iamb | Man page Source code |
| is_disco | Source code |
| is_knowledge | Source code |
| knowledge | Man page Source code |
| knowledge.Disco | Source code |
| knowledge_to_caugi | Man page Source code |
| latex_escape | Source code |
| list_registered_tetrad_algorithms | Man page Source code |
| make_method | Man page Source code |
| make_runner | Man page Source code |
| make_suff_stat | Source code |
| make_tikz | Man page Source code |
| make_tikz_standard | Source code |
| make_tikz_tiered | Source code |
| mix_data | Man page |
| new_disco | Source code |
| new_disco_method | Man page Source code |
| nodes | Source code |
| npv | Man page Source code |
| num_data | Man page |
| num_data_latent | Man page |
| order_restrict_amat_cpdag | Source code |
| order_restrict_pag_skel | Source code |
| order_restrict_sepset | Source code |
| parse_heap_gb | Source code |
| pc | Man page Source code |
| plot | Man page |
| plot.Disco | Man page Source code |
| plot.Knowledge | Man page Source code |
| plot_caugi_common | Source code |
| precision | Man page Source code |
| prepare_knowledge | Source code |
| print.Disco | Man page Source code |
| print.Knowledge | Man page Source code |
| print_section | Source code |
| rcolor_to_tikz | Source code |
| rdata_to_tetrad | Source code |
| recall | Man page Source code |
| reexports | Man page |
| reg_test | Man page Source code |
| reg_test_each_dir | Source code |
| register_tetrad_algorithm | Man page Source code |
| remove_edge | Man page Source code |
| remove_tiers | Man page Source code |
| remove_vars | Man page Source code |
| reorder_tiers | Man page Source code |
| reposition_tier | Man page Source code |
| require_edge | Man page Source code |
| reset_tetrad_alg_registry | Man page Source code |
| seq_tiers | Man page Source code |
| set_knowledge | Man page Source code |
| set_knowledge.Disco | Source code |
| set_knowledge.disco_method | Man page Source code |
| set_tetrad_test | Source code |
| shd | Man page |
| sim_dag | Man page Source code |
| sp_fci | Man page Source code |
| specificity | Man page Source code |
| summary.Disco | Man page Source code |
| summary.Knowledge | Man page Source code |
| tabu | Source code |
| tetrad_data_to_rdata | Source code |
| tetrad_graph | Source code |
| tfci | Man page Source code |
| tfci_run | Man page Source code |
| tges | Man page Source code |
| tges_run | Man page Source code |
| tpag | Source code |
| tpc | Man page Source code |
| tpc_example | Man page |
| tpc_run | Man page Source code |
| tpdag | Source code |
| translate_custom_test_to_bnlearn | Source code |
| unfreeze | Man page Source code |
| v_orient_temporal | Source code |
| verify_tetrad | Man page Source code |
