extract_chkpt_draws: Extract Draws from 'CmdStanMCMC' Objects

In chkptstanr: Checkpoint MCMC Sampling with 'Stan'

Extract Draws from CmdStanMCMC Objects

Description

A convenience function for extracting the draws from a CmdStanMCMC object.

Usage

extract_chkpt_draws(object, phase)

Arguments

object	An object of class CmdStanMCMC.
phase	Character string. Which phase during checkpointing? The options included warmup and sample. The latter extracts the draws with inc_warmup = FALSE, which is the default in draws

Value

A 3-D draws_array object (iteration x chain x variable).

Note

This can be used to extract the draws in general by setting phase = "sample" which then only includes the post-warmup draws.

Examples

## Not run: 
 library(cmdstanr)

# eight schools example
fit_schools_ncp_mcmc <- cmdstanr_example("schools_ncp")

drws <- extract_chkpt_draws(object = fit_schools_ncp_mcmc,
                            phase = "sample")

# compare to cmdstanr
all.equal(drws, fit_schools_ncp_mcmc$draws())

## End(Not run)

chkptstanr documentation built on April 29, 2022, 5:06 p.m.