citbcmst: CIT Breast Cancer Molecular SubTypes Prediction
Version 1.0.4

This package implements the approach to assign tumor gene expression dataset to the 6 CIT Breast Cancer Molecular Subtypes described in Guedj et al 2012.

AuthorLaetitia Marisa, Aurelien de Reynies, Mickael Guedj
Date of publication2014-01-10 13:13:30
MaintainerLaetitia Marisa<MarisaL@ligue-cancer.net>
LicenseGPL (>= 2)
Version1.0.4
URL http://cit.ligue-cancer.net
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("citbcmst")

Popular man pages

chanrion08: Non Affymetrix Breast Cancer Expression dataset from Chanrion...
cit.assignBcmst: cit.assignBcmst
citbcmst: Coreset data used to classify data in Guedj et 2011
cit.centroids: cit.centroids
cit.dfAggregate: cit.dfAggregate
cit.dist: cit.dist
cit.distToCentroids: cit.distToCentroids
See all...

All man pages Function index File listing

Man pages

bertheau07: Affymetrix (U133A) Breast Cancer Expression Data from...
chanrion08: Non Affymetrix Breast Cancer Expression dataset from Chanrion...
cit.assignBcmst: cit.assignBcmst
citbcmst: Coreset data used to classify data in Guedj et 2011
cit.centroids: cit.centroids
cit.dfAggregate: cit.dfAggregate
cit.dist: cit.dist
cit.distToCentroids: cit.distToCentroids

Functions

Files

inst
inst/extdata
inst/extdata/exp.norm.bertheau07.RData
inst/extdata/exp.norm.chanrion08.RData
inst/doc
inst/doc/citbcmstdemo.R
inst/doc/citbcmstdemo.pdf
inst/doc/citbcmstdemo.rnw
NAMESPACE
data
data/citbcmst.RData
data/datalist
R
R/cit.centroidsFunc.R
R/cit.bcmst.R
vignettes
vignettes/citbcmstdemo.rnw
MD5
build
build/vignette.rds
DESCRIPTION
man
man/cit.dist.Rd
man/cit.centroids.Rd
man/citbcmst.Rd
man/cit.dfAggregate.Rd
man/cit.assignBcmst.Rd
man/cit.distToCentroids.Rd
man/bertheau07.Rd
man/chanrion08.Rd
citbcmst documentation built on May 19, 2017, 5:27 p.m.

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