Description Usage Arguments Value Note Author(s) See Also
View source: R/cit.centroidsFunc.R
This function computes and returns the distance matrix computed by using the specified distance measure to compute the distances between the rows of a data matrix.
1 2 3 4 5 6 7 |
x |
a numeric matrix, data frame or "dist" object. |
meth |
the distance measure to be used. This must be one of "pearson","spearman","euclidean", "maximum", "manhattan", "canberra", "binary" or "minkowski". Any unambiguous substring can be given. |
use |
method for computing covariance when NAs, choice between "pairwise.complete.obs", "all.obs" and "complete.obs" (cf cor function parameter) |
diag |
logical value indicating whether the diagonal of the distance matrix should be printed |
upper |
logical value indicating whether the upper triangle of the distance matrix should be printed |
p |
the power of the Minkowski distance. |
replaceNA |
a boolean indicating if NA value should be replace by |
required
This is a contribution from the Tumor Identity Cards (CIT) program founded by the 'Ligue Nationale Contre le Cancer' (France): http://cit.ligue-cancer.net. For any question please contact CITR@ligue-cancer.net
Aurelien de Reynies, Mickael Guedj
dist
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