citccmst: CIT Colon Cancer Molecular SubTypes Prediction

This package implements the approach to assign tumor gene expression dataset to the 6 CIT Colon Cancer Molecular Subtypes described in Marisa et al 2013.

Author
Laetitia Marisa
Date of publication
2014-01-10 13:13:32
Maintainer
Laetitia Marisa<MarisaL@ligue-cancer.net>
License
GPL (>= 2)
Version
1.0.2
URLs

View on CRAN

Man pages

cit.assignCcmst
cit.assignCcmst
citccmst
CIT colon expresson dataset used to classify data in Marisa...
cit.centroids
cit.centroids
cit.dfAggregate
cit.dfAggregate
cit.dist
cit.dist
cit.distToCentroids
cit.distToCentroids

Files in this package

citccmst
citccmst/inst
citccmst/inst/extdata
citccmst/inst/extdata/citvalid.exp.norm.RData
citccmst/inst/doc
citccmst/inst/doc/citccmstdemo.rnw
citccmst/inst/doc/citccmstdemo.pdf
citccmst/inst/doc/citccmstdemo.R
citccmst/NAMESPACE
citccmst/data
citccmst/data/citccmst.RData
citccmst/R
citccmst/R/cit.centroidsFunc.R
citccmst/R/cit.ccmst.R
citccmst/vignettes
citccmst/vignettes/citccmstdemo.rnw
citccmst/MD5
citccmst/build
citccmst/build/vignette.rds
citccmst/DESCRIPTION
citccmst/man
citccmst/man/cit.dist.Rd
citccmst/man/cit.centroids.Rd
citccmst/man/cit.dfAggregate.Rd
citccmst/man/cit.distToCentroids.Rd
citccmst/man/citccmst.Rd
citccmst/man/cit.assignCcmst.Rd