climtrends: Statistical Methods for Climate Sciences

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Absolute homogeneity tests SNHT absolute 1-breaks, 1-break, SD different from 1, 2-breaks, Buishand, Pettitt, von Neumann ratio and ratio-rank, Worsley, and Craddock, Relative homogeneity tests SNHT absolute 1-breaks, 1-break SD different from 1, 2-breaks, Peterson and Easterling, and Vincent, Differences in scale between two groups Siegel–Tukey, Create reference time series mean, weights/correlation, finding outliers Grubbs, ESD, MAD, Tietjen Moore, Hampel, etc.

Author
Jose Gama [aut, cre]
Date of publication
2016-05-26 17:56:25
Maintainer
Jose Gama <rxprtgama@gmail.com>
License
GPL (>= 3)
Version
1.0.6

View on CRAN

Man pages

adjHomogenization
Homogenization adjustment within a certain window
allfilesIEObyPathPattern
Read multiple IEO files
allfileUSGS2timeseries
Read multiple USGS files
annual.precipitation.totals.Madison
Annual precipitation totals in inches Madison (Wisconsin)
BSXFUN
Apply a function to each element of 2 arrays with singleton...
Buishand.Critical.Values
Critical values for the Buishand test
Buishand.range.test
Buishand range absolute homogeneity test
climtrends-internal
Internal RAHRS functions
completeMissingValues.daily.mean
complete missing values on a time series of daily values...
craddock.test
Craddock test
CreateReferenceSeriesFromFiles.mean
Create a reference series (averaging)
create.reference.series.fromfiles.mean.correlations
Create a reference series (averaging weights/correlations)
cumulative.deviations
cumulative deviations test (parametric test for step jump in...
Cumulative.Deviations.Test.Critical.Values
Critical values for Worsley's likelihood ratio test
daily.climatology.from.daily.data
Daily climatology
distribution.free.CUSUM
Distribution Free CUSUM (non-parametric test for step jump in...
ESDstatistic
ESD statistic
fileUSGS2timeseries
Read a a USGS discharge file
FillDailyGapsWithSomeValue
fill missing days with some value
FillYearlyGapsWithSomeValue
fill missing days with some value
findCommonPeriod
Find the common period between several time series
findOutliers.ESD.test
Find outliers based on the ESD test
findOutliers.Grubbs.twosided
Find outliers based on the Grubbs test
findOutliers.hampel
Find outliers based on quantiles
findOutliers.MAD
Find outliers based on the absolute deviation around the...
findOutliers.quant
Find outliers based on quantiles
findOutliers.sd
Find outliers based on quantiles
findOutliers.Tietjen.Moore.test
Find outliers based on the Tietjen Moore test
findOutliers.trimmed.means
Find outliers based on trimmed means
findOutliers.zscore
Find outliers based on the z-score
FirstMonthOfSeason
Get the first/last month of a season
getInfoHomogenization
Useful info from an homogenization test
getNDP
Read data from a Numeric Data Package (NDP) file from GCMD
getshiftvalue
Get peak value and its sign
IsLeapYear
Determine if a year is a leap year
lastDayOfTheMonth
Get the last day of a month
levelSignifMarks
Use symbols to represent the level of significance
list.continuous.days
List the days with continuous data
listHomogStats
List with the years of a probable shift and other info
listHomogTZ
Useful info from an homogenization test
medianCrossing.test
Median Crossing (non-parametric test for randomness)
monthly.anomalies.from.daily.data
Monthly anomalies
monthly.climatology.from.daily.data
Monthly climatology
MonthlyFuncFromDay
Monthly values converted from daily values
MonthTrendYearsFuncFromDay
Monthly values converted from daily values
peaksP
Use symbols to represent the level of significance
Pettitt.Critical.Values
Critical values for the Pettitt test
Pettitt.test
Pettitt test
plotHomog
Plot the graphics for many homogenization methods
plotSeriesAndRefSimple
Plot a series and one or more reference series
plotSeriesDifference
Plot the difference between 2 series
rank.difference.test
Rank Difference test (non-parametric test for randomness)
rank.sum.test
Rank Sum test
Rank.Von.Neumann.Ratio.Test.Critical.Values
Critical values for the Rank Von-Neumann Ratio Test
readclimexp.knmi.nl
Read KNMI Climate Explorer files
readclimexp.knmi.nl.12month
Read monthly values KNMI Climate Explorer files
readCRDEC
Read GHCN-D files
readECAdata
Read data from a ECA data file
readEtmgegFile
Read USHCN files
readGHCNymd
Read GHCN-Daily files
readHERTTAdailyCSV
Read HERTTA files
readHERTTAdmyQdaily
Read HERTTA month+year+Q files
readMeteoSwiss
Read MeteoSwiss files
readndp040stationDat
Read data from a CDIAC data file
readPSMSLmonthly
Read PSMSL files
readUSHCN
Read USHCN files
ReadYearAnd12MonthsData
Read a TAB delimited data file with year and months in...
siegel.tukey
annual mean of the absolute day-to-day differences of DTR...
SNHTabsolute
standard normal homogeneity test (SNHT) absolute homogeneity...
SNHTabsolute2SDs
standard normal homogeneity test (SNHT) absolute homogeneity...
SNHTabsoluteDoubleShift
standard normal homogeneity test (SNHT) absolute homogeneity...
SNHTabsoluteII
standard normal homogeneity test (SNHT) absolute homogeneity...
SNHTabsoluteTrend
standard normal homogeneity test (SNHT) absolute homogeneity...
SNHT.Critical.Values
Critical values for the Pettitt test
SNHTrelative
standard normal homogeneity test (SNHT) relative homogeneity...
SNHTrelative2SDs
standard normal homogeneity test (SNHT) relative homogeneity...
SNHTrelativeDoubleShift
standard normal homogeneity test (SNHT) relative homogeneity...
SNHTrelativeII
standard normal homogeneity test (SNHT) relative homogeneity...
SNHTrelativeTrend
standard normal homogeneity test (SNHT) relative homogeneity...
SNHT.TwoDifferentSDs.Critical.Values
Critical values for the standard normal homogeneity test...
SNHT.TwoShifts.Critical.Values
Critical values for the standard normal homogeneity test...
sqplot
Number of elements for a plot to be nearly square
Tietjen.Moore
Tietjen Moore statistic
trimmed.mean
trimmed mean
turning.points.test
Turning Points (non-parametric test for randomness)
ValuesBetween2Dates
Get values between two dates
ValuesBetween2years
Get values between two years
vDTR
annual mean of the absolute day-to-day differences of DTR...
Von.Neumann.ratio
Pettitt test
Von.Neumann.ratio.rank
Von Neumann ratio rank test
Von.Neumann.Ratio.Test.Critical.Values
Critical values for the Von Neumann ratio test
wetDayCount
Get number of wet days
woOp
x without y
Worsley.Likelihood.Ratio
Worsley's Likelihood Ratio test
Worsley.Likelihood.Ratio.Test.Critical.Values
Critical values for Worsley's likelihood ratio test
YearFuncFromDay
Annual values converted from daily values
yearly.average.temperature.Turin.Milan
Yearly average temperature in Turin, Milan

Files in this package

climtrends
climtrends/inst
climtrends/inst/extdata
climtrends/inst/extdata/c_Casl_3_ref.txt
climtrends/inst/extdata/c_As00_o.txt
climtrends/inst/extdata/RR_SOUID101991.txt
climtrends/inst/extdata/c_Hori2.txt
climtrends/inst/extdata/c_Casl_3.txt
climtrends/inst/extdata/xgdcnCA008201000.dat
climtrends/inst/extdata/etmgeg_280.txt
climtrends/inst/extdata/c_casl_O_3_REF.TXT
climtrends/inst/extdata/c_Kada2.txt
climtrends/inst/extdata/SD_SOUID101992.txt
climtrends/NAMESPACE
climtrends/demo
climtrends/demo/demoCumulativeDeviations.R
climtrends/demo/Hampel3.R
climtrends/demo/demoCraddockTest.R
climtrends/demo/demoWorsleyLR.R
climtrends/demo/Hampel2.R
climtrends/demo/00Index
climtrends/demo/demoWijngaard2003.R
climtrends/demo/Hampel1.R
climtrends/data
climtrends/data/Von.Neumann.Ratio.Test.Critical.Values.rda
climtrends/data/Cumulative.Deviations.Test.Critical.Values.rda
climtrends/data/annual.precipitation.totals.Madison.rda
climtrends/data/SNHT.TwoShifts.Critical.Values.rda
climtrends/data/yearly.average.temperature.Turin.Milan.rda
climtrends/data/SNHT.Critical.Values.rda
climtrends/data/SNHT.Critical.Values.Alexandersson1997.rda
climtrends/data/Buishand.Critical.Values.rda
climtrends/data/SNHT.TwoDifferentSDs.Critical.Values.rda
climtrends/data/Worsley.Likelihood.Ratio.Test.Critical.Values.rda
climtrends/data/Pettitt.Critical.Values.rda
climtrends/data/Rank.Von.Neumann.Ratio.Test.Critical.Values.rda
climtrends/R
climtrends/R/climtrends.R
climtrends/MD5
climtrends/DESCRIPTION
climtrends/man
climtrends/man/ValuesBetween2years.Rd
climtrends/man/Von.Neumann.ratio.rank.Rd
climtrends/man/readndp040stationDat.Rd
climtrends/man/sqplot.Rd
climtrends/man/findOutliers.ESD.test.Rd
climtrends/man/levelSignifMarks.Rd
climtrends/man/findOutliers.Grubbs.twosided.Rd
climtrends/man/SNHTrelative.Rd
climtrends/man/ReadYearAnd12MonthsData.Rd
climtrends/man/monthly.anomalies.from.daily.data.Rd
climtrends/man/ESDstatistic.Rd
climtrends/man/readECAdata.Rd
climtrends/man/siegel.tukey.Rd
climtrends/man/findOutliers.zscore.Rd
climtrends/man/readCRDEC.Rd
climtrends/man/findOutliers.Tietjen.Moore.test.Rd
climtrends/man/findOutliers.hampel.Rd
climtrends/man/FirstMonthOfSeason.Rd
climtrends/man/Pettitt.Critical.Values.Rd
climtrends/man/Buishand.Critical.Values.Rd
climtrends/man/BSXFUN.Rd
climtrends/man/CreateReferenceSeriesFromFiles.mean.Rd
climtrends/man/ValuesBetween2Dates.Rd
climtrends/man/woOp.Rd
climtrends/man/findOutliers.sd.Rd
climtrends/man/YearFuncFromDay.Rd
climtrends/man/findOutliers.MAD.Rd
climtrends/man/getNDP.Rd
climtrends/man/SNHTrelativeTrend.Rd
climtrends/man/medianCrossing.test.Rd
climtrends/man/daily.climatology.from.daily.data.Rd
climtrends/man/Rank.Von.Neumann.Ratio.Test.Critical.Values.Rd
climtrends/man/findCommonPeriod.Rd
climtrends/man/turning.points.test.Rd
climtrends/man/listHomogStats.Rd
climtrends/man/readclimexp.knmi.nl.Rd
climtrends/man/FillYearlyGapsWithSomeValue.Rd
climtrends/man/completeMissingValues.daily.mean.Rd
climtrends/man/Worsley.Likelihood.Ratio.Rd
climtrends/man/MonthTrendYearsFuncFromDay.Rd
climtrends/man/readGHCNymd.Rd
climtrends/man/plotSeriesDifference.Rd
climtrends/man/getInfoHomogenization.Rd
climtrends/man/SNHT.Critical.Values.Rd
climtrends/man/SNHTabsolute.Rd
climtrends/man/Von.Neumann.ratio.Rd
climtrends/man/readHERTTAdmyQdaily.Rd
climtrends/man/Worsley.Likelihood.Ratio.Test.Critical.Values.Rd
climtrends/man/fileUSGS2timeseries.Rd
climtrends/man/yearly.average.temperature.Turin.Milan.Rd
climtrends/man/allfileUSGS2timeseries.Rd
climtrends/man/findOutliers.trimmed.means.Rd
climtrends/man/readUSHCN.Rd
climtrends/man/rank.sum.test.Rd
climtrends/man/SNHT.TwoShifts.Critical.Values.Rd
climtrends/man/annual.precipitation.totals.Madison.Rd
climtrends/man/create.reference.series.fromfiles.mean.correlations.Rd
climtrends/man/cumulative.deviations.Rd
climtrends/man/SNHTrelativeDoubleShift.Rd
climtrends/man/readHERTTAdailyCSV.Rd
climtrends/man/monthly.climatology.from.daily.data.Rd
climtrends/man/listHomogTZ.Rd
climtrends/man/Von.Neumann.Ratio.Test.Critical.Values.Rd
climtrends/man/rank.difference.test.Rd
climtrends/man/findOutliers.quant.Rd
climtrends/man/SNHTrelativeII.Rd
climtrends/man/climtrends-internal.Rd
climtrends/man/wetDayCount.Rd
climtrends/man/Buishand.range.test.Rd
climtrends/man/vDTR.Rd
climtrends/man/adjHomogenization.Rd
climtrends/man/SNHTabsoluteDoubleShift.Rd
climtrends/man/allfilesIEObyPathPattern.Rd
climtrends/man/SNHTabsolute2SDs.Rd
climtrends/man/craddock.test.Rd
climtrends/man/getshiftvalue.Rd
climtrends/man/FillDailyGapsWithSomeValue.Rd
climtrends/man/readMeteoSwiss.Rd
climtrends/man/SNHT.TwoDifferentSDs.Critical.Values.Rd
climtrends/man/MonthlyFuncFromDay.Rd
climtrends/man/Cumulative.Deviations.Test.Critical.Values.Rd
climtrends/man/distribution.free.CUSUM.Rd
climtrends/man/readPSMSLmonthly.Rd
climtrends/man/plotHomog.Rd
climtrends/man/SNHTrelative2SDs.Rd
climtrends/man/list.continuous.days.Rd
climtrends/man/SNHTabsoluteII.Rd
climtrends/man/peaksP.Rd
climtrends/man/Pettitt.test.Rd
climtrends/man/readEtmgegFile.Rd
climtrends/man/plotSeriesAndRefSimple.Rd
climtrends/man/lastDayOfTheMonth.Rd
climtrends/man/readclimexp.knmi.nl.12month.Rd
climtrends/man/SNHTabsoluteTrend.Rd
climtrends/man/trimmed.mean.Rd
climtrends/man/Tietjen.Moore.Rd
climtrends/man/IsLeapYear.Rd