climwin: Climate Window Analysis

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Contains functions to detect and visualise periods of climate sensitivity (climate windows) for a given biological response.

Author
Liam D. Bailey and Martijn van de Pol
Date of publication
2016-06-01 07:40:05
Maintainer
Liam D. Bailey <liam.bailey@anu.edu.au>
License
GPL-2
Version
1.0.0
URLs

View on CRAN

Man pages

autowin
Test for auto-correlation in climate.
Chaff
Annual laying date of breeding common chaffinch (Fringilla...
ChaffClim
Daily climate data from 1965 to 2012.
crosswin
Test the correlation between two climate variables.
explore
Visualise the weight distribution for given parameter values
Mass
Body mass data since 1979.
MassClimate
Daily climate data since 1979.
MassOutput
Example output dataframe from function slidingwin.
MassRand
Example output dataframe from function randwin.
medwin
Determine the median start and end time for climate windows
Offspring
Reproductive success of birds since 2009.
OffspringClimate
Daily climate data since 2009.
plotall
Visualise climate window data
plotbest
Visualise the best climate window
plotbetas
Plot model beta estimates
plotcor
Visualise climate cross correlation or autocorrelation.
plotdelta
Plot deltaAICc of models
plothist
Create a histogram of randomised deltaAICc values
plotweights
Plot distribution of model weights
plotwin
Plot the start and end time of best climate windows
pvalue
Determine the probability that a given climate signal is...
randwin
Climate window analysis for randomised data
singlewin
Fit a single climate window
Size
Average size of red winged fairy wren (Malurus elegans)...
SizeClimate
Daily climate data from 2006 to 2015.
slidingwin
Test for a climate windows in data.
weightwin
Find a weighted climate window

Files in this package

climwin
climwin/inst
climwin/inst/CITATION
climwin/inst/doc
climwin/inst/doc/advanced_climwin.html
climwin/inst/doc/advanced_climwin.R
climwin/inst/doc/climwin.html
climwin/inst/doc/climwin.R
climwin/inst/doc/climwin.Rmd
climwin/inst/doc/advanced_climwin.Rmd
climwin/tests
climwin/tests/testthat.R
climwin/tests/testthat
climwin/tests/testthat/testcrosswin.R
climwin/tests/testthat/testplotweights.R
climwin/tests/testthat/testpvalue.R
climwin/tests/testthat/testdateconverter.R
climwin/tests/testthat/testplothist.R
climwin/tests/testthat/testmedwin.R
climwin/tests/testthat/testsinglewin.R
climwin/tests/testthat/testrandwin.R
climwin/tests/testthat/testplotwin.R
climwin/tests/testthat/testweightwin.R
climwin/tests/testthat/testweightfuncWG.R
climwin/tests/testthat/testplotall.R
climwin/tests/testthat/testplotbest.R
climwin/tests/testthat/testexplore.R
climwin/tests/testthat/testplotdelta.R
climwin/tests/testthat/testslidingwin.R
climwin/tests/testthat/testautowin.R
climwin/tests/testthat/testplotcor.R
climwin/tests/testthat/testplotbetas.R
climwin/NAMESPACE
climwin/NEWS.md
climwin/data
climwin/data/OffspringClimate.rda
climwin/data/SizeClimate.rda
climwin/data/MassRand.rda
climwin/data/Offspring.rda
climwin/data/MassOutput.rda
climwin/data/MassClimate.rda
climwin/data/Mass.rda
climwin/data/Chaff.rda
climwin/data/Size.rda
climwin/data/ChaffClim.rda
climwin/R
climwin/R/plotbest.R
climwin/R/randwin.R
climwin/R/explore.R
climwin/R/plotall.R
climwin/R/plotweights.R
climwin/R/plotcor.R
climwin/R/crosswin.R
climwin/R/slidingwin.R
climwin/R/weightwin.R
climwin/R/singlewin.R
climwin/R/autowin.R
climwin/R/plotdelta.R
climwin/R/plothist.R
climwin/R/medwin.R
climwin/R/datasets.R
climwin/R/plotbetas.R
climwin/R/plotwin.R
climwin/R/zzz.R
climwin/R/otherfunctions.R
climwin/R/pvalue.R
climwin/vignettes
climwin/vignettes/climwin.Rmd
climwin/vignettes/advanced_climwin.Rmd
climwin/README.md
climwin/MD5
climwin/build
climwin/build/vignette.rds
climwin/DESCRIPTION
climwin/man
climwin/man/OffspringClimate.Rd
climwin/man/crosswin.Rd
climwin/man/MassOutput.Rd
climwin/man/explore.Rd
climwin/man/ChaffClim.Rd
climwin/man/Offspring.Rd
climwin/man/plotcor.Rd
climwin/man/randwin.Rd
climwin/man/plotwin.Rd
climwin/man/Chaff.Rd
climwin/man/singlewin.Rd
climwin/man/slidingwin.Rd
climwin/man/plotdelta.Rd
climwin/man/MassRand.Rd
climwin/man/Mass.Rd
climwin/man/plotall.Rd
climwin/man/MassClimate.Rd
climwin/man/plotbest.Rd
climwin/man/plothist.Rd
climwin/man/plotweights.Rd
climwin/man/medwin.Rd
climwin/man/SizeClimate.Rd
climwin/man/plotbetas.Rd
climwin/man/Size.Rd
climwin/man/pvalue.Rd
climwin/man/autowin.Rd
climwin/man/weightwin.Rd