NEWS.md

In cloneRate: Estimate Growth Rates from Phylogenetic Trees

cloneRate 0.2.3

• Minor changes for CRAN resubmission

cloneRate 0.2.2

• Wrap long-running examples in \donttest{} for CRAN

cloneRate 0.2.1

• Change to CRAN installation instructions in README

cloneRate 0.2.0

Update for CRAN compatibility

• Make birth-death MCMC available to all users of package
• Move rstan from suggests to imports
• Update rstan methods to be consistent with rstantools recommendations

cloneRate 0.1.0

Add birth-death MCMC

• Add birth death MCMC targeting likelihood in equation 5 of Stadler 2009 "On incomplete sampling under birth–death models and connections to the sampling-based coalescent"
• Implements MCMC using rstan package, which is now listed in suggests

cloneRate 0.0.1

• Added a NEWS.md file to track changes to the package.

cloneRate documentation built on Sept. 22, 2023, 5:09 p.m.