clues: Clustering Method Based on Local
Version 0.5.9

We developed the clues R package to provide functions for automatically estimating the number of clusters and getting the final cluster partition without any input parameter except the stopping rule for convergence. The package also provides functions to evaluate and compare the performances of partitions of a data set both numerically and graphically.

Browse man pages Browse package API and functions Browse package files

AuthorFang Chang [aut, ctb], Weiliang Qiu [aut, cre], Vincent Carey [aut, ctb], Ruben H. Zamar [aut, ctb], Ross Lazarus [aut, ctb], Xiaogang Wang [aut, ctb]
Date of publication2016-10-14 08:16:08
MaintainerWeiliang Qiu <stwxq@channing.harvard.edu>
LicenseGPL (>= 2)
Version0.5.9
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("clues")

Man pages

adjustedRand: Calculate Agreement Indices Between Two Partitions for a Data...
clues: Clustering Method Based on Local Shrinking
clustering: Data Clustering (After Data Shrinking)
compClust: Compare different partitions for a data set
Curve: Curve Data Set
get_CH: Compute CH Index
get_Silhouette: Compute Silhouette Index
Maronna: The Maronna Data Set
plotAvgCurves: Average Trajectory Plot for Each Cluster
plot.clues: Draw Scatter Plots or Plot of Average Trajectory per Cluster,...
plotClusters: Scatter Plots of Clusters in Specified Dimensions
plotCurves: Plot Trajectories for Each Cluster
print.clues: Print Method for CLUES Objects
Ring: The Broken-Ring Data Set
shrinking: Data Sharpening Based on K-nearest Neighbors
summary.clues: Summary Method for CLUES Objects
Vowel: The Vowel Data Set

Functions

ChooseK_CH Source code
ChooseK_sil Source code
Curve Man page
Maronna Man page
Ring Man page
Vowel Man page
adjustedRand Man page Source code
clues Man page Source code
clues_CH Source code
clues_sil Source code
clustering Man page Source code
compClust Man page Source code
curve Man page
curve.mem Man page
getDistSets Source code
getDisti Source code
getDistij Source code
get_CH Man page Source code
get_Silhouette Man page Source code
maronna Man page
maronna.mem Man page
plot.clues Man page Source code
plotAvgCurves Man page Source code
plotClusters Man page Source code
plotClusters.default Source code
plotCurves Man page Source code
print.clues Man page Source code Source code
print.summary.clues Man page Source code
rankCorr Source code
rankDist Source code
ring Man page
ring.mem Man page
shrinking Man page Source code
summary.clues Man page Source code
vowel Man page
vowel.mem Man page

Files

inst
inst/CITATION
inst/doc
inst/doc/vignettes
inst/doc/vignettes/WDBC.dat
inst/doc/vignettes/clues.Rnw
inst/doc/vignettes/log_running_time_p.pdf
inst/doc/vignettes/clues.pdf
inst/doc/vignettes/clues.bib
inst/doc/vignettes/log_running_time.pdf
src
src/silhouette3.f95
src/dmedian.f95
src/clustering2.f95
src/sharpen2.f95
src/dsort.f95
src/adjustedRand.c
src/CH.f95
src/chooseK.f95
NAMESPACE
NEWS
data
data/Curve.rda
data/Vowel.rda
data/Ring.rda
data/Maronna.rda
R
R/clues.R
R/compClust.R
R/clues_sil.R
R/clues_CH.R
R/shrinking.R
R/clustering.R
R/rankDist.R
R/adjustedRand.R
R/view.R
MD5
DESCRIPTION
man
man/get_CH.Rd
man/Maronna.Rd
man/print.clues.Rd
man/shrinking.Rd
man/plotAvgCurves.Rd
man/Vowel.Rd
man/plotCurves.Rd
man/plotClusters.Rd
man/compClust.Rd
man/Ring.Rd
man/clustering.Rd
man/get_Silhouette.Rd
man/plot.clues.Rd
man/summary.clues.Rd
man/clues.Rd
man/adjustedRand.Rd
man/Curve.Rd
INDEX
clues documentation built on May 20, 2017, 4:58 a.m.